Gene Sden_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3198 
SymbolsspA 
ID4019724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp3832095 
End bp3832724 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content44% 
IMG OID637957248 
Productstringent starvation protein A 
Protein accessionYP_564197 
Protein GI91794546 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTG CTGCCAACAA ACGCTCTATC ATGACACTGT TTTCCGGTGC CGATGATTTA 
TATAGTCATC AAGTACGTAT CGTACTGGCT GAAAAAGGAG TCACTGTCGA TGTATTGCAG 
GTTGACCCTA GCGAAAACCC TGAAGATTTA CTGGAAGTAA ATCCATACAA CTCTGTGCCT 
ACCTTGGTAG ACCGCGAATT AGTTTTGTAT GAGTCGCGTA TCATAATGGA ATATTTAGAT 
GAGCGTTTTC CTCATCCGCC ATTGATGCCT GTATATCCAG TTTCTCGTGG TCAAAGCCGC 
TTAATGATGC ACCGCATCGA TTCTGACTGG TACACTTTGG TCGAACGCAT TCGCAAGGGT 
GAAAAGGCCG AAGCTGCACG TAAAGAATTG ACTGAAAGCT TAGTGGCTTT AGGGCCGGTT 
TTTGCTGAAA TGCCGTATTT CATGAGCGAA GAATTCGGTT TAACCGATTG CTATCTTGGC 
CCATTATTGT GGCGTTTGCC TGTATTGGGT ATCAACTTAG ATAGCCGCAC CTCTAAAGAT 
ATCAATGCTT ATATGACGCG AATTTTTGAA CGCGAGTCAT TTAAAGCATC GTTAACAGAG 
GCTGAGCGCG AAATGCGCAT GGGCATGTAA
 
Protein sequence
MAVAANKRSI MTLFSGADDL YSHQVRIVLA EKGVTVDVLQ VDPSENPEDL LEVNPYNSVP 
TLVDRELVLY ESRIIMEYLD ERFPHPPLMP VYPVSRGQSR LMMHRIDSDW YTLVERIRKG 
EKAEAARKEL TESLVALGPV FAEMPYFMSE EFGLTDCYLG PLLWRLPVLG INLDSRTSKD 
INAYMTRIFE RESFKASLTE AEREMRMGM