| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2791 |
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| Symbol | gltD |
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| ID | 4019310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3337509 |
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| End bp | 3338966 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637956837 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_563793 |
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| Protein GI | 91794142 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACG ATTTTCAATT TATCCAAGTG GGTCGCCACG ACCCTAAAAA ACATGATACG
CCACTGCGTA AGACACAGTT TATTGAGATA TACCAAGATT TTAGTGAGCC AGATGTAAAG
CAACAAGCGG ATCGCTGTCT GGATTGTGGT AACCCCTATT GTGAGTGGAA ATGCCCGCTG
CACAATTACA TTCCAAACTG GCTCAAGCTT GCCGAGGAAG GCCGGGTAAT GGAAGCGGCC
ACCTTGATGC ACGAAACCAA TACCTTGCCT GAAATCTGCG GCAGAGTCTG TCCTCAAGAC
AGATTGTGTG AAGGCGCCTG TACCTTGAAC GATGAGTTTG GCGCCGTCAC TATTGGCAAC
ATTGAAAAAT ACATCACAGA TGCGGCCCTC GCCCAAGGTT GGCGACCGGA TTTAAGTCAT
GCCCCCAAGG GCAGAACCGA GCGGGTTGCC ATCATAGGTG CGGGGCCCGC TGGCCTTGGC
TGCGCCGACG TCTTAGCCCG CAACGGCGTC AAAGCCGTAG TCTATGACAA GTACCCGCAA
ATTGGCGGCT TGCTCACCTA CGGCATTCCC TCCTTTAAGT TGGATAAATC CGTGCTAGCC
ACTCGCCGCA CTGTACTTGA AGGCATGGGC ATCGAATTTA AGCTTAATAC CACGGTCGGC
AAAGACATAA GCTTTCAAAG CCTGCTTGAT GAATACGACG CGGTATTTCT TGGCATGGGC
ACTTACACCG CCATGAAGGC AAGGCTTGCC AACGAAGATG CCAAGGGGGT TATTCAAGCT
CTGCCCTATC TTATCGGTAA TACTCATCAG CTCATGGGCA GCCAAGACCC CGCCGCGCCT
TACATAGATC TTGCGGGTAA GAATGTGGTG GTGCTGGGCG GCGGTGATAC CGCCATGGAT
TGCGTGCGCA CCGCAGTGCG TCAAGGGGCG GCAAACGTCA GCTGCGTCTA TCGTCGCGAT
GAAGCCAATA TGCCAGGTTC TCGCCGTGAA GTGCAAAATG CCAAAGAAGA AGGGGTTGAG
TTTTTATTTA ACCAACAGCC TGTGGCTATA CACACTGAAA ACGATGCCGT TGTGGGTATT
GAATGTGTTG AAACCCAAAT GGGCGCCGCC GATGCCAGTG GTCGCCAAAG CGCCGAGGTT
ATTCCTGGCA GTGAGCAAAT CCTTAAAGCC GATGCCATCA TCATCGCCTT TGGTTTTCAG
GCAAGCCCTG CCCCTTGGTT TAAGGATTTT GGCATAGACA CCAACGAATG GGGTCTGGTC
AAAGCCTGCA AGCAGGATGA TATGGCCTTT CAAACCACTA ACCCTAAAGT GTTTGCCGGT
GGCGACATGG TGAGGGGCTC TGATCTTGTG GTGACCGCCA TTGCCGAAGG CCGCGATGCT
GCATTAGGAA TATTAACTTA CCTTGGCGAG CAAGCAGCGC AGCAAAAGGA TGAGGTGCAA
ACAGCCGCTT GCAGCTAA
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| Protein sequence | MSNDFQFIQV GRHDPKKHDT PLRKTQFIEI YQDFSEPDVK QQADRCLDCG NPYCEWKCPL
HNYIPNWLKL AEEGRVMEAA TLMHETNTLP EICGRVCPQD RLCEGACTLN DEFGAVTIGN
IEKYITDAAL AQGWRPDLSH APKGRTERVA IIGAGPAGLG CADVLARNGV KAVVYDKYPQ
IGGLLTYGIP SFKLDKSVLA TRRTVLEGMG IEFKLNTTVG KDISFQSLLD EYDAVFLGMG
TYTAMKARLA NEDAKGVIQA LPYLIGNTHQ LMGSQDPAAP YIDLAGKNVV VLGGGDTAMD
CVRTAVRQGA ANVSCVYRRD EANMPGSRRE VQNAKEEGVE FLFNQQPVAI HTENDAVVGI
ECVETQMGAA DASGRQSAEV IPGSEQILKA DAIIIAFGFQ ASPAPWFKDF GIDTNEWGLV
KACKQDDMAF QTTNPKVFAG GDMVRGSDLV VTAIAEGRDA ALGILTYLGE QAAQQKDEVQ
TAACS
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