| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2421 |
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| Symbol | |
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| ID | 4018919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2882490 |
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| End bp | 2883113 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956448 |
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| Product | TonB-like protein |
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| Protein accession | YP_563424 |
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| Protein GI | 91793773 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00537232 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAAGAG CACTAGTATC AATCTTAATT GGTGCTGCTG TGACTTTTGG TCTGTTCGCT
TTTATGGCGT TCTTAGTAGG CGGCGGTGCG ACTCGCAACG CCGACTCTAC AGAGACCCCT
GTTATCGAAA TTACTATGGA TAAACAGGAT TCGAAAGCAC AGAAGAAACC AAGGGTGACA
CCTAAGCCAC CCCCACCGCC TGAGCAGCCA CCAAAGCCGG ATACCACTCC GCCTGAAACA
TCATCCAGTA TAGACACTAA CATGTCTTTC AATATGGGTG GTTTACAGTC TGGTGGTGTT
AGCACTGGCT TTAAACTGGG TAATATGATG ACTCGAGACG GCGATGCTAC ACCTATCGTG
CGTATCGAAC CTCAGTACCC GATTGCAGCC GCTCGTGATG GCAAAGAAGG TTGGGTGCAG
TTGAGCTTTA CGATTAACGA GTTAGGTGGT GTTGATGATG TGTCTGTCAT TAAAGCCGAT
CCTAAACGTG TGTTTGACCG TGATGCTATT CGCGCCTTAA GAAAGTGGAA GTACAAGCCA
AAAATTGTCG ATGGTAAAGC CATTCGTCAG CCAGGCATGA CTGTACAGCT TGATTTCAGT
CTTAATAAAG ACGGAGGTAG ATAA
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| Protein sequence | MLRALVSILI GAAVTFGLFA FMAFLVGGGA TRNADSTETP VIEITMDKQD SKAQKKPRVT
PKPPPPPEQP PKPDTTPPET SSSIDTNMSF NMGGLQSGGV STGFKLGNMM TRDGDATPIV
RIEPQYPIAA ARDGKEGWVQ LSFTINELGG VDDVSVIKAD PKRVFDRDAI RALRKWKYKP
KIVDGKAIRQ PGMTVQLDFS LNKDGGR
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