Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1855 |
Symbol | |
ID | 4018338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2181138 |
End bp | 2182460 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637955872 |
Product | phage integrase |
Protein accession | YP_562862 |
Protein GI | 91793211 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGACAG CTTCCCAACC CCAATATCCT CCGGTTATTC CACTATTTGA TGCCCCTGAG TTTATCATTC AAGGTAATCC TGTTGTTAAT CAGTATATTA CTCGAATAAG CCTAAATTCA GTCAGCGATG CAGGTCTCGT AGTTGAGCAC GCCGCCGACT GGCTATTTGA GCAAAAAGCC AGTGAAAACA ACTATAAAGC TTATCGCAGT GAGCTCACGA CATTCTTACA TTGGTGTTTC GATGTGGCGT GTTTATCTGC GGCGAATGTC AGCCGAAAAG ACATGAGCCG CTACGTGGAT TACTGCCAAA ACCCACCAAT AAGCTTAATC GGCTATTTTA ATGTGCCGCA GTTTTGTGCG CCCAAATCCA CAAACGCGAG TGGCAGTGAT GAACGTTTTC CCAATCCTAA GTGGCGACCC TTTGTGGGCA AGAAACACTT AGGGGAATGT CAGCCGTATC GCTTAAGTGA CAACGCATTG AAAACAAAAC TGGCGATTTT GTCATCCTTC TATGGTTATT TAATCAGTGA AGAATACAAC GAGCGCAATC CGGCCCAGTT ATGGCTTAAT CACAGTCGCT TTGCCATAGC CCGCAAATTC ACCATTAATG AAGATGACAA TAACCAAGCC TTCACTGAGC TGCAGTGGTC CTACGTGATT AGTACGGCCA AACGCTTAGC AGAAAAGGAT CCGCAAACAC ACCGGCGCAG TCTGTTTTTA CTCTACTTAT TGTACGGCTG TTACTTACGT ATTTCCGAGG TTAGCGCCCG TGCTGGCTAT TCACCGGTCA TGAGCCAGTT TAAGCAGGAC AGGCAAACCG GTATTTGGTA CTTTCATGTG CCTATCTCTA AAAGCGGCAA ACCCCGCAAT ATCGCCATAT CAAAAGCCTT GCTGGCAGCC TTGATTGAAT ATCGACGTTT TTTAGGGTTA ACGGATTATC CCAGCGCCGA TGAAAATCAT CCGATATTTA TCCGGCACCG CGCCGCAGGC CATGGACGCG ACACAGGTAT AGTCAATGCC AATCTTGGCA TCCGTCAAAT CCGTGATCAG ATAGACACGC TCATTCAACT GGCGGCGCAA ACCGCCTTAG ATCATGGTCT AGAACATGAT GCCAGTGCCA TGAGAAAAAT GACTGCCCAT AATATTCGTC ATACCGGTAT CACCCACGAC ATCAACTTGA ACCGCAGACC TTTGTCACAC GTACAAGCCG ACGCAGGCCA TGAAAGCATA GACACCACAT CCCAATATTT ACACACCAAC CAAACCGAAC GGCACCAGAG TGCCTTTGAA AAGCCCTTGG ATCACTTAGC TGACATTGAC TAG
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Protein sequence | MTTASQPQYP PVIPLFDAPE FIIQGNPVVN QYITRISLNS VSDAGLVVEH AADWLFEQKA SENNYKAYRS ELTTFLHWCF DVACLSAANV SRKDMSRYVD YCQNPPISLI GYFNVPQFCA PKSTNASGSD ERFPNPKWRP FVGKKHLGEC QPYRLSDNAL KTKLAILSSF YGYLISEEYN ERNPAQLWLN HSRFAIARKF TINEDDNNQA FTELQWSYVI STAKRLAEKD PQTHRRSLFL LYLLYGCYLR ISEVSARAGY SPVMSQFKQD RQTGIWYFHV PISKSGKPRN IAISKALLAA LIEYRRFLGL TDYPSADENH PIFIRHRAAG HGRDTGIVNA NLGIRQIRDQ IDTLIQLAAQ TALDHGLEHD ASAMRKMTAH NIRHTGITHD INLNRRPLSH VQADAGHESI DTTSQYLHTN QTERHQSAFE KPLDHLADID
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