| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1372 |
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| Symbol | |
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| ID | 4017619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1595756 |
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| End bp | 1596886 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955369 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_562381 |
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| Protein GI | 91792730 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGAA TAACAGTGTT AGTTTCAAAA CAAACAGAGT TAGAACAACA AATATTGAAC
CAAACTGATA TCGAAAACAG CCAGTTATCC TGCCTAACTC AAGGGGAACA GGCGGTGCTT
AGGGCGTTAA AAAGTCAGTG CACAAAAGTG TTTGTCACAG GTGCTGGGGG TTTTTTGGGC
AAAGCCATTT GTAAGCGCTT AAGGGCTGCT GGGATTGAAG TGGTCGGGTT TGCGAGAAGT
GCCTACCCTG AGCTTGTGCG CCTTGGGGTC GACATGTACC AAGGGGATAT CTGCGACTAT
GACAAGCTGC TCGATGCCAT GAAAGGCTGT GACTTAGTGT TTCACGTCGC CTCTAAGGCT
GGAGTCTGGG GCAGTGAAGA CAGTTATTTT CTGCCCAACG TCAATGGCAC TGCCAATGTG
CTACGTGCCT GTAAAAAACA TAAAATCCAA AAGCTTGTGT ATACCAGCAC CCCCAGCGTG
ACCTTTCAAG GCCAAGATGA AAACGGTATC GATGAGTCGG CGCCCTACGC CAGTAAATTC
CTAAACTTTT ATGCTCAGTC TAAGGCCTGC GCCGAGAAGA TGGTGCTTGC CGCTAACGGT
GAAAAAGTGA AAACTGTGGC CTTAAGGCCG CATCTTATCT GGGGGCCAGG GGATCCCCAT
TTAGTGCCGA GAGTACTAGC CAGAGCCAAA GCCGGCAAAC TTAAGCTTGT GGGCAAAGAG
GATAAATTAG TCGATACCAT TTTTATTGAT AATGCCGCGT ACGGCCATTT ATTGGCGGGG
CTAGATTTAT GCCAAGCTGC TAAGAGTGCT GGTAAGGCGT ACTTTCTCAG TAATGATGAA
CCCATCACCA TGGCGGCTAT GTTAAATAGC ATCTTAGCCA GCGCCGATTT ACCACCAGTC
ACTAAGCGAG TTCCCGCTAA ACTGGCCTTT TATGTGGGTT ACTTGTTAGA GCTTGTTTAT
GGCGTGCTGC GGGTTCGCAC TGAGCCTGTG ATGACACGTT TTATAGCCAA GCAATTATCC
TCTAGCCATT ATTTCGATAT TAGTGCCGCT AAAAATGATT TGGGTTACTC GCCGCAAGTG
AGTATGGCCG AGGGGATGGA AAAGCTTAAA CAGTCACTAC TGAAAAGCTA A
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| Protein sequence | MEGITVLVSK QTELEQQILN QTDIENSQLS CLTQGEQAVL RALKSQCTKV FVTGAGGFLG
KAICKRLRAA GIEVVGFARS AYPELVRLGV DMYQGDICDY DKLLDAMKGC DLVFHVASKA
GVWGSEDSYF LPNVNGTANV LRACKKHKIQ KLVYTSTPSV TFQGQDENGI DESAPYASKF
LNFYAQSKAC AEKMVLAANG EKVKTVALRP HLIWGPGDPH LVPRVLARAK AGKLKLVGKE
DKLVDTIFID NAAYGHLLAG LDLCQAAKSA GKAYFLSNDE PITMAAMLNS ILASADLPPV
TKRVPAKLAF YVGYLLELVY GVLRVRTEPV MTRFIAKQLS SSHYFDISAA KNDLGYSPQV
SMAEGMEKLK QSLLKS
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