Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0822 |
Symbol | |
ID | 4017091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 941609 |
End bp | 942418 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637954813 |
Product | Beta-lactamase |
Protein accession | YP_561834 |
Protein GI | 91792183 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000252294 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTTT CAAGAATGAT GTTAAATCTA GTGCGCAAGG TGTTCACTAC GGGGCCCAGA GTGCTCAGTG TTGTCAGCTT GCTAAGTGTT AACGTATTAG GCATAAACTT GGCACAGGCT GTGACTAGCG AGGAAAGCGT ACCGAAATTT AGCATTGAGC CATTAGCCAA TAATGTGTAT TTGCACCAGT CCTTTCAACA GACTGAAAGT TTTGGCCTAG TCGGCGCCAA TGGCTTAGTG GTGATTAATG AGGGAAAGGC CTTTATCGTC GATACCCCTT GGTCTGAAAG TGACACTGCG GTGCTGGTTG ATTGGATTAA AGAACAAGGT TATCAATTGG TTGGCAGTGT ATCAACTCAC TCACATGAAG ACAGAACAGC AGGCATAGGC TGGCTCAATG CTCACAGTAT TCCGACATTT GCCTCTGAAT TAACCAATCA GATTTTAAAA GAATCGGAAA AGCCGCTGGC AAGCCATCCT TTTGCACTGC CACAGGCGAG TTTGTTTGAT GGCCAGCTGG AGGCATTTTA TCCCGGTGGT GGGCATGCGC TAGATAATTT AGTGGTCTGG TTGCCTAAAT CAAATATTCT CTTTGGCGGC TGTTTAGTTC GCAGCTTAGA CTCAACAAGC CTAGGCTACA CGGGAGAAGC GGTGTTAGAA CAATGGCCGA CATCTGCGAT GAAAGTGCTC GCTAAATTCC CTGATGTAGA ACTTGTGGTG CCAGGCCATG GTGAGCCTGG TGATAAACAG CTGTTAATTC ACACAAAGGC TTTGGCCGAA TCTGGGGCGA AGCAAGCGTC AGCTAAATAA
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Protein sequence | MEFSRMMLNL VRKVFTTGPR VLSVVSLLSV NVLGINLAQA VTSEESVPKF SIEPLANNVY LHQSFQQTES FGLVGANGLV VINEGKAFIV DTPWSESDTA VLVDWIKEQG YQLVGSVSTH SHEDRTAGIG WLNAHSIPTF ASELTNQILK ESEKPLASHP FALPQASLFD GQLEAFYPGG GHALDNLVVW LPKSNILFGG CLVRSLDSTS LGYTGEAVLE QWPTSAMKVL AKFPDVELVV PGHGEPGDKQ LLIHTKALAE SGAKQASAK
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