Gene Sdel_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_2028 
Symbol 
ID8593582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp2041779 
End bp2043488 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content36% 
IMG OID 
ProductPAS sensor protein 
Protein accessionYP_003305076 
Protein GI268680645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATT TACTCTCGAA AATTAACGAT CTTAAGCAAG AAATCACACT GCTTAAAAGC 
CAGAATAGGC GTATTTTAGA GTGTGCTGTT ACTGAAAAAA AAGCGCTAGA ACGCCTTGCC
AAAAAAGCGC AACTCTATTT TAATAACTCT GATCTTGCCT ACATCGTGTT GGATGAAAAG
CAATGCATTG TCGATGTCAA TGAGACGTTT ACGCACCTTT TTGGTTACAC CAAAGAAGAA
GTTTTAGGTT TACATATCAG TACCCTTTTT ACGTCGCAAA AGCGATATGA AAAGTGGTGG
CACGTACATT TAAATGATGG TGATTTTGAG CATGTGAGTA ATTTAGAGTA CCGTTTGTAC
ACCAAAGAGG GCATGGCATT TTGGGCAGAA CTTTTTGGTA AAAAATTTAT GGATGAGGAA
AAAGCGCTGA GCATTTGGAG TGTTCGCGAT ATCTCCTTAC GCATCAAGTC TCGTAATACC
ATTGCAAAAC TCAATCTCAA ATATCAAAAA CAGTTACGTG ACATGGAAAC GATTTTAAAT
ATTATTCCTG TGCCTGTCTT TATTAAAGAT CGCTATTTAC GTTACATCGG ATGCAGTCGT
GCTTTTTGTG CCTATTTTGG CTTGAAAAAA GAAGATATTC TTGGAAGAAC CGTTTTTGAT
CTCTATCCTC TTGAAATTGC CAGCAGACTC TATGAAAAAG ATCAAGAGAT GCTTAATGTC
AGTCATCAAA CCTATAAAAT AAATACAATA TCGCCACTGA CTCAGCAAGA AGTAACATTA
GAAATTCAAA AAAAACGTAT GATGCGCAAT GCTGTCTTTG ATGGCTTTGT TGGTGTTTTC
ATTGATGTCA CAGAGGTGGA AAAACAAGAA GTTTATCTGC AAAACCGTAT TCGAGAAGAG
GTGGATAAAA ACCTTAAAAT CCAAGCCATC TACCAAGAGG AGATGGTACG TAATGCCAAA
TTTAGTACTA TTGGACGGAT GGCAGCGGGT ATTACCCATG AGATTAATAC GCCTTTGACG
TATATCAAGG GTAATTTTGA GATGCTCATC GATGATATTA TGGCGATTGT ACCTGATGGT
ACACGTAAAA ATGTCATGCT CAAAGATAGC CAATCGATTC AAGAGGGCAT TGAACGTATT
GAGAGTATTA TTGGAACGAT GAGAGAAGCA TCACAAAAAA GCCATGAGCA AAAAGAGATA
CTAAATATGT ACGAACTTCT TTGTGCTTCC CTTACCCTTT GCTACCATCG TTCAAAGCAA
ATTGTTACCA TTCATCTGAA TGAAAAAATT TTTGATCTGA ACTTTTCAAA AGATGAATAC
CACGTTACAT GTAACGTTCA AAAACAGCGT ATCGAGCAAG TATTTGTGAT TATTTTAAAC
AATGCTTTAG ATGAACTAAT AAAGATTGAA TCCTTTGAAA AACGCTCTTT ACATGTAACA
ATTTTTCAAG AACATGAAAA AGTTATAGTA CGTTTTTGTG ATAATGGTGG AGGCATTGAT
GCTGCAATTT TACCTCATAT TTTTGAGCCA TTTGAAAGTA CTAAAATGAG CTCTGGCATT
GGGATTGGAC TCAACATCGC TCAACAAATT GTAATTCAAA ATGAGGGCGA AATTTGTGCT
TTTAATGAGG ATGAAGGTGC CGTTTTTGAA GTGCACTTAC CTTTGGTAAA AGAAGCAGAG
ACACTTTTAG ATAAAAGGCG TTTCATATAA
 
Protein sequence
MKDLLSKIND LKQEITLLKS QNRRILECAV TEKKALERLA KKAQLYFNNS DLAYIVLDEK 
QCIVDVNETF THLFGYTKEE VLGLHISTLF TSQKRYEKWW HVHLNDGDFE HVSNLEYRLY
TKEGMAFWAE LFGKKFMDEE KALSIWSVRD ISLRIKSRNT IAKLNLKYQK QLRDMETILN
IIPVPVFIKD RYLRYIGCSR AFCAYFGLKK EDILGRTVFD LYPLEIASRL YEKDQEMLNV
SHQTYKINTI SPLTQQEVTL EIQKKRMMRN AVFDGFVGVF IDVTEVEKQE VYLQNRIREE
VDKNLKIQAI YQEEMVRNAK FSTIGRMAAG ITHEINTPLT YIKGNFEMLI DDIMAIVPDG
TRKNVMLKDS QSIQEGIERI ESIIGTMREA SQKSHEQKEI LNMYELLCAS LTLCYHRSKQ
IVTIHLNEKI FDLNFSKDEY HVTCNVQKQR IEQVFVIILN NALDELIKIE SFEKRSLHVT
IFQEHEKVIV RFCDNGGGID AAILPHIFEP FESTKMSSGI GIGLNIAQQI VIQNEGEICA
FNEDEGAVFE VHLPLVKEAE TLLDKRRFI