Gene Sdel_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_0565 
Symbol 
ID8592095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp549249 
End bp550496 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content38% 
IMG OID 
Producthistidine kinase HAMP region domain protein 
Protein accessionYP_003303636 
Protein GI268679205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGAA ATTCTATTTT AAATAAAATT AGCGCTATTT TCGGGCTCTC TTTATGTTTA 
TTGGTGATGT TTTTTGCGCT TTTGCTAGAG CATCAAGGGG AGCGTAATAT GGAAAACATG
AAACAACGCC AACTCCAATC GGTCAACTAC CTCTTAGTGA TGTATCGAAA CAATGTTCAA
CCTTCCGATA TTGAAGAGTA TTTTAATAAC TTTGGATTGA AAAAAGTCTC CAGTAAACAC
CTTAGGGATT CTGTATTGGA GCGAGGGGTG GTGATTTTTC AAAAGCTCTC TCCTATTAGT
CGATTTTCTT CTATTGTGTA CAATGATCAT TACTATCTCT TTATCGACAA TTTTGAATCG
AGTGTGCTTT TGGAGAGTCA AGAACATAAA AGTTTCAATG AAAGTTTATG GGTTGTTTTT
GTCATTGCTT TGTTGATTTT GGTTTACATG TATATTTCAA TTTATAAGAG CATTTCGCCA
CTGCGAACGC TCAGTGCGCA GATTCGTAAA TTTGCGGGTG GGGATTTGGA GATTACATGT
AAAAGTGATT CGAGTGATGA AATCGGTGAA GTGGCAAATG AGTTTGACAA GGCGGTCAAA
AAGATACGCG ATTTGATTCA ATCCAGACAA CTCTTTTTAC GCACATTAAT GCATGAACTA
AAAACGCCGA TTGGCAAAGG GCGTATTGTC TCTGAAATGC TAGAGGATGA AACGGCGAAA
AAACGGTTGG TAAATGTCTT TAGCCGTTTG GATTTATTGA TTGGCGAATT TTCCAAAGTA
GAGCAGTTAA GTACCAAACA GTATGACTTA CATGTAAAAG AGTACACGAT GATTCCTATC
ATTGAACAGG CGATTGATTT GTTGATGCTC GATGAGAAGA AAAAAGAGGA ACAGATTTGC
CTTGAAGGTG ATTTTGATTT TATGGTTGCC GTGGACTTTG ATTTGATGGC ATTGGCGATT
AAGAATTTGA TGGACAATGC ATTGAAGCAT AGTTTTACGA AAAAAGTTTT TATCAAACAA
AAGGGGCAAA ACGTCATTAT TGCCAATCAA GGAGAGCCTT TGTCCATGGC GATAGAGGAG
TATTTACAGC CTTTTGTTTC AGGCTCTAAG GCGTGTGGTA GTGGATTAGG GCTTGGACTT
TACATTGTTT CAAATATTAT GGCGTTGCAT GGATTGCGTT TAGCGTATGC GTATGTTGAG
GGATATCATG AATTTAGTGT TGATTTTTCA GAAGGAAAGA GCGCATGA
 
Protein sequence
MIRNSILNKI SAIFGLSLCL LVMFFALLLE HQGERNMENM KQRQLQSVNY LLVMYRNNVQ 
PSDIEEYFNN FGLKKVSSKH LRDSVLERGV VIFQKLSPIS RFSSIVYNDH YYLFIDNFES
SVLLESQEHK SFNESLWVVF VIALLILVYM YISIYKSISP LRTLSAQIRK FAGGDLEITC
KSDSSDEIGE VANEFDKAVK KIRDLIQSRQ LFLRTLMHEL KTPIGKGRIV SEMLEDETAK
KRLVNVFSRL DLLIGEFSKV EQLSTKQYDL HVKEYTMIPI IEQAIDLLML DEKKKEEQIC
LEGDFDFMVA VDFDLMALAI KNLMDNALKH SFTKKVFIKQ KGQNVIIANQ GEPLSMAIEE
YLQPFVSGSK ACGSGLGLGL YIVSNIMALH GLRLAYAYVE GYHEFSVDFS EGKSA