Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_0284 |
Symbol | |
ID | 8591800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | - |
Start bp | 271042 |
End bp | 271926 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | LysR substrate-binding protein |
Protein accession | YP_003303356 |
Protein GI | 268678925 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACTCA AAGAATTAAG CATTTTTTAC CATCTCTGCG AAGATGCCCA TCTGTGCAAT CTCTCTAAAA AGCTAGGCAT TACGCAGTCT GCCATCTCCC TTGCCATCAA ATCTTTAGAG AAAAAAGTAG GAGAGCCTTT GTTTGACCGT ATTGGCAAAA AATTGGTCTT AAGTGAAAAA GGAAGGCTCT TTTATGAAAA AACCCATCCG CATTATGAAG CACTCAAAGA AGCCCAACTC TTTTTTTCGC ACAACGCCCT TGCTGGAAGT TTAAAAATCG CATCGAGTAA GACCATCGGC GAGTACCTTA TGCCAAGCAT CGTTTATGAT TTTCGTCTCT TGCATCCTAG TGTGAGTGTG CATAAAACCA TTCAAAACTC AGCCTCTATC ATTGAAATGG TGAAAAATGG AGCGATAGAT ATGGGTTTTA TCGAATCCTC GTGTGATGAA AAAGAGATAC GCAAAGAGGT CATCGCTGAT GATGAGCTTA TCGTCGTGAG TAGCGACAAA GCGCTTCACA ACAAACAGTG CTACATTGAT GAGCTCTTTG ATAAAAAGTG GATTTTGCGA GAAAAGGGCT CAGGCACACG GGAGGTTTTT TTAGAGGCTT TAGGGGAGAG TGTCAAAACC CTTCCGCTCT TTTTAGAATT TAGTGAGTTT GAGGAGGCAA AAACCCTTTT ACTTCGCTAC AACGAAAGTA TCACCTGCCT CTCTCGTGTG GTGGTCGAAA ATGAGCTAAA ACGAGGGGAG TTGTTTGAGG TGACACTCAA AAATATCAGC CTCAAACGCC CTTTTTATCT TATTTACCAC AAAGACAAAT ACGCCAGTAA ACTCTTTAGC GAATTTAAGC GTTTTGTCCT TGAAGCATCT TCCGATAGGC AATAA
|
Protein sequence | MTLKELSIFY HLCEDAHLCN LSKKLGITQS AISLAIKSLE KKVGEPLFDR IGKKLVLSEK GRLFYEKTHP HYEALKEAQL FFSHNALAGS LKIASSKTIG EYLMPSIVYD FRLLHPSVSV HKTIQNSASI IEMVKNGAID MGFIESSCDE KEIRKEVIAD DELIVVSSDK ALHNKQCYID ELFDKKWILR EKGSGTREVF LEALGESVKT LPLFLEFSEF EEAKTLLLRY NESITCLSRV VVENELKRGE LFEVTLKNIS LKRPFYLIYH KDKYASKLFS EFKRFVLEAS SDRQ
|
| |