Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3849 |
Symbol | |
ID | 3966998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4851331 |
End bp | 4852065 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637922946 |
Product | hypothetical protein |
Protein accession | YP_529316 |
Protein GI | 90023489 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTAAGGA AAATATTTGT AGGTTGTTTG GCCTTTTTTA TTCCTCCACT GGCTTTCCTG TATTTATCAC GGGGCTGGTT AGCGTTAATT TACCTTTTGG TGCTTATTGT TACGGCAGTA GGTGATTACT ACGCCCAGCG TTATTTTGGA TTAGGCGGGC TGGGGTTGGT CTTAGCCATC GTAGCTACAG TACATGCATT AAGGATTGCG CAAAGCGAAA CCAATGTGGT TAAACACAAG TTTTATAATT ATTGGTGGGG TGCGCTAACT ATCCCCCTTG CGGTAGCATT ACTTAGCTTT GCTGCGCGTT CATTTTTATA TGAGCCTTTC AGTATACCCT CTGAATCCAT GTCGCCTACG TTAATGCCTG GTGACTATAT TCTGGTGAAG AAGTCTGGTT ATGGGAATTA TGGAACCTGG GGTGTGAGCT TATTCCGCTC AGATAACCCT AACAATAAAC CCAAATCAGG AGAAATAGTT GCACTTTATC CGCCTGGCGA AACTCGCATA TATATTGAAA GAATAATCGG AATACCTGGC GATGAGGTTC GATTAGATGG TGCTAATTTG ACAATAAATG GCGAAATCGT CTCGAAAGAA GTAGAGGCTG GCTTATTTTC TGAATCAATT GGTGAGCAAC ATTACACCGT GAAATATTTA GGCCCTCCAT TTCGATATAG GAATTACGAA GTTTTAGTGC CGCCTGGACA CTATTTTGTG ATGGGTGATA ACTGA
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Protein sequence | MLRKIFVGCL AFFIPPLAFL YLSRGWLALI YLLVLIVTAV GDYYAQRYFG LGGLGLVLAI VATVHALRIA QSETNVVKHK FYNYWWGALT IPLAVALLSF AARSFLYEPF SIPSESMSPT LMPGDYILVK KSGYGNYGTW GVSLFRSDNP NNKPKSGEIV ALYPPGETRI YIERIIGIPG DEVRLDGANL TINGEIVSKE VEAGLFSESI GEQHYTVKYL GPPFRYRNYE VLVPPGHYFV MGDN
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