Gene Sde_3785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3785 
Symbol 
ID3966859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4784219 
End bp4784512 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content47% 
IMG OID637922882 
Producthypothetical protein 
Protein accessionYP_529252 
Protein GI90023425 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000153969 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCTG TTATTTTTAC CGCCACTACC AACCCGCTTG ACGATGAATA CAGTCAAACC 
GCAGCAAAAA TGCGCGACCT AGCGTTTAGC AAGTACGGTT GTTTAGAGCT AAACAGTGTT
TGCCAAGGCG ATCAGGAAAT TACTGTTTCC TATTGGCCCA CTTTAGCGCA TATTAGCGCT
TGGCAAGCAG ACCCCGCCCA CCGTGCGGCG CAAGCACTTG GCAAGCAAAA ATGGTACAAA
GCATACTCAG TACAAGTAAC GCATATTGAG CGCCAATATC AGCAAAAATG TTAA
 
Protein sequence
MYAVIFTATT NPLDDEYSQT AAKMRDLAFS KYGCLELNSV CQGDQEITVS YWPTLAHISA 
WQADPAHRAA QALGKQKWYK AYSVQVTHIE RQYQQKC