| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3533 |
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| Symbol | |
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| ID | 3966375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4489031 |
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| End bp | 4489981 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922630 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_529000 |
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| Protein GI | 90023173 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTAA TTCTGGATTA TATATTCACC GTACAATTCG CTATTTTTGC GGCGATTGTT
ATTTTTGCCA AACTCGGCCT TAAGTTTGTG CCGCAAAACC GCGCTTATGT TATTGAGCGT
TTCGGCAAAT ACAACCGCAC TATTGAAGCC GGGATAAATT TTATTATCCC CATTATGGAT
AAAGTAGCTC ACGACAGGTC GCTAAAAGAG CAAGCTGTAG ATGTGCCAAG CCAAAGTGCC
ATCACCAAAG ATAATATTTC ACTCACCGTA GATGGTGTTT TGTATTTTCG TGTGCTCGAC
CCTTACAAAG CCTCTTACGG TGTTGAGGAT TACGCCTTTG CCGTTACCCA GCTTGCACAA
ACCACTATGC GTTCCGAAAT AGGTAAAATG GAGCTAGATA AAACCTTCGA AGAGCGCGAC
CAGCTAAACG CCAATATTGT TAATGCTATT AACCAAGCTG CCGAGCCTTG GGGCGTGCAG
GTGTTGCGCT ATGAAATTAA AGATATTGTG CCGCCACAAT CTGTTATGTC TGCAATGGAA
GCGCAAATGC GTGCCGAGCG TGAAAAGCGC GCCAAGATTT TAGAATCGGA AGGTGATAGA
CAAGCTGAAA TTAACCGCGC AGAAGGTGAA AAGCAATCTA AGGTACTATC TGCAGAAGGT
GATAAAGCCG AGCAAATTTT GCGCGCGGAA GGTGAAGCGG GCGCAATACT CCGAGTTGCC
GAAGCACAAG CCGACGCACT GCGCAAAATA GGTGAAGTGG CCAACACCCC AGTGGGGCAA
TCTGCCGTGC AACTGGACTT AGCCACTAAA GCTATTGAAG CGCGCCACGC TATTGCTCGC
GACTCGTCTA TTGTTTTACT ACCAGATAAC GCAACCGATG CCGCTTCGGT AGTCACACAG
GCCATGTCGG TTATTAACAC CATTAACAAA AACCAAACAC CAGCGGCTTA A
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| Protein sequence | MELILDYIFT VQFAIFAAIV IFAKLGLKFV PQNRAYVIER FGKYNRTIEA GINFIIPIMD
KVAHDRSLKE QAVDVPSQSA ITKDNISLTV DGVLYFRVLD PYKASYGVED YAFAVTQLAQ
TTMRSEIGKM ELDKTFEERD QLNANIVNAI NQAAEPWGVQ VLRYEIKDIV PPQSVMSAME
AQMRAEREKR AKILESEGDR QAEINRAEGE KQSKVLSAEG DKAEQILRAE GEAGAILRVA
EAQADALRKI GEVANTPVGQ SAVQLDLATK AIEARHAIAR DSSIVLLPDN ATDAASVVTQ
AMSVINTINK NQTPAA
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