| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3428 |
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| Symbol | |
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| ID | 3966154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4364215 |
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| End bp | 4366377 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922525 |
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| Product | hypothetical protein |
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| Protein accession | YP_528895 |
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| Protein GI | 90023068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.660009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000342661 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACCTAA AAAACATATC GCGCCTGCTT TCGCACGGCA TAGTCAGCGC TATTGCGATA
TTGCTAGCGC TTAATACCCA AGCCCAAGTA CAACTCGAAA AAGAATACAA AGTGGCAGAC
AACGCCCTGT ATTTTAACGG CCGCAAAGTG GGCAGCAATG CAGAAGATAA CGGCACCGGC
GTATACGATT ATAAATTTGG CGGCAGAATA TCCGCCCACG GTGATGCAAT AAAAGTATAT
AAAAACTTCA TTTTTACCAC CTGGTATCGC GGCGGAAAAT TCGATCGCCA TATGATGCTA
TCCCGCTATA ACACCAGAAC TGGCGTAGTT AAAACCATTG AGTTTCCACA CCGCCACACT
GGCTTCAATG GCAAGTGGTG GATAGGCGAA TCCCACAATA CTATTGCCAT TGGTATTAGC
CCGAAAGACG AAAAAATACA TTTACTGTTT GATATGCACT CCTACGCAAA CAGCGGCGCT
TTCCGCGATG ACTACTTTCG CTACGCCTAT TCCGTAGAAA ATGCGGCTAC CGTTGCCGAT
AACGATTTTA AGCTAAGCCT ATTTGTAAAA GACGGCCCCA ACGACTATAA CCACGTAAGC
TTAAACGGCA CGGCAGACCC AGCTCAGTTT CAAGATTTAA CCTACCCGTA TTTTTTCTTA
AACGACGATA ACGACTTATT AATGCACATG CGCGTGGGCG GTAACGACAA CGGCGCCTAT
GTTTTTTCTA AATACAACGC TAACACCAGC AAGTGGGATA GGCTAACGCA ATTTAATCAT
CTAAACGCTA AAACAAAAGG CCAAGCTTAT AACTGGGGCC TATACGGCAG AATGAAATAC
GTAGACGGAA AACTACAAGT AGCGTTCCAG CGCCGAAGCG GCAATAAGAA TGATAAGTAC
GAATATCAAA ACGGAATTTA CTACGCCTAC TCAAACGACC AAAGCGGAAA AAGCCAATGG
AAAGACCACA CAGGCGCGGG CTTTAATATT CCTTTCGCAA ACGCCGATAG AATTAAAATT
TACGAACCCG GTAACTTAGT TGAAGCCACA GGTAAAAACG AAGTATATAT TGTTGGCGGT
TTTGACTTTA CAGTAACCGA TCGCGGCGAT GTACATATAA TTAGCCAAGT GAAAGACAAA
AAGAACAATG TTGTAAAACA CCTACACTCT TACAAACCCA AAGGCGCGGC CAACTTTAGG
CACACAACCG ACTTTTCGGG CGCCACACAG TTGTACACCT ACGCCAACAA TGTTTACATT
ATTGGCCTAA AAGGCGGTCG CCCGTTTGTA AAAAAAGCTA ACGGAGGAAC CAATAATTTC
ACTACTATTT ACGAAACCAA TAGCGGAAAA AGTTTTGCCC ACGGTGTGCC GCATATTTAC
AACGGCAAAC TTTATTACTA TATGCAAGCT AAAGGCGATA GCACTCAATT ACCTATATAC
GTTCAAATAA TTGATCTAGG CCTAGGTAAT TCAGAAACAT CTAACCCAAG TAATGACGGC
CCCGCAGGCT ATACCTTTTC TGCACGAGAA GGCGGTACAG TAAATATAAC TGGCACTATG
AACGTAGCCT ATGGCGCTGG CGATAGTTTT AATTATCACT ACAACCAAAC CAGCGATTTA
CCATGCAACA ACCAAACGTT TGGCGACCCC AAACCAAGAA CAATAAAAAA TTGCTACGTT
AAAAGTGTGC AAGTAGAAAC CAGCACAGAC CAATGCGATA CCACCAATCA ATGCCGCGCA
GAGTACAGTT TTTTTGACGG CGCTATGGAT TGTGCCGGCA GCGCATCTAA CGCAAGTATC
TGCATGTGCG GTAACGAACG CTGCGACTCT TTAAACGATT CAAATACTGA TAATAGCTCT
GGTAGCAATG CAAGCGGCGC ATACTGCGCA GGCATTGCAG AAGTATCACA AGGCGTAAAA
AGAGAATTAA ACCTTAACAA CGTTAACTGT GTTAAATTCT CAGAGAACCT TGCAGGCAAT
ACCCTACAGG TATGGGATAG CGACAACGCT TCATGCGATT TTAGAGGTGT GGTGGAATCC
CGCGATGGCA CAGGCAACTT AACCATAAGC GCCAACTATC ATTCAGCCGA TTCATTTACC
GGTCGCGTTA TACGCTTTAC ACCTAGTAAC AATTGTAAAT ATGTGCAGGT TAGGTCGTAT
TAG
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| Protein sequence | MNLKNISRLL SHGIVSAIAI LLALNTQAQV QLEKEYKVAD NALYFNGRKV GSNAEDNGTG
VYDYKFGGRI SAHGDAIKVY KNFIFTTWYR GGKFDRHMML SRYNTRTGVV KTIEFPHRHT
GFNGKWWIGE SHNTIAIGIS PKDEKIHLLF DMHSYANSGA FRDDYFRYAY SVENAATVAD
NDFKLSLFVK DGPNDYNHVS LNGTADPAQF QDLTYPYFFL NDDNDLLMHM RVGGNDNGAY
VFSKYNANTS KWDRLTQFNH LNAKTKGQAY NWGLYGRMKY VDGKLQVAFQ RRSGNKNDKY
EYQNGIYYAY SNDQSGKSQW KDHTGAGFNI PFANADRIKI YEPGNLVEAT GKNEVYIVGG
FDFTVTDRGD VHIISQVKDK KNNVVKHLHS YKPKGAANFR HTTDFSGATQ LYTYANNVYI
IGLKGGRPFV KKANGGTNNF TTIYETNSGK SFAHGVPHIY NGKLYYYMQA KGDSTQLPIY
VQIIDLGLGN SETSNPSNDG PAGYTFSARE GGTVNITGTM NVAYGAGDSF NYHYNQTSDL
PCNNQTFGDP KPRTIKNCYV KSVQVETSTD QCDTTNQCRA EYSFFDGAMD CAGSASNASI
CMCGNERCDS LNDSNTDNSS GSNASGAYCA GIAEVSQGVK RELNLNNVNC VKFSENLAGN
TLQVWDSDNA SCDFRGVVES RDGTGNLTIS ANYHSADSFT GRVIRFTPSN NCKYVQVRSY
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