Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3150 |
Symbol | |
ID | 3965584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4025769 |
End bp | 4026359 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637922247 |
Product | divalent cation transporter |
Protein accession | YP_528619 |
Protein GI | 90022792 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTT TAATCGTTCT TGGTGTACTC GTATTACTCT TTTTTTACGT AGTTTCTATC TACAACCGTT TAGTAAGCCT TAGAAATCGC TATCAAAACG CTTTTGCCCA AATAGAGGTG CAACTCAAGC GCCGCTACGA TCTTATCCCT AACCTTGTAG AAACCGCAAA AGCCTACATG AGCCACGAGC GCGAAACACT CGAAGCCGTA ATAAGCGCAC GCAACGGCGC AATAAGCAGC CTTAAAACTG CTGCGGGCAA CCCCGGTGAT GCAGGCGCAA TGCAAGGGCT TGCCGGTGCA GAGGGTATAT TATCCAACGC GTTGGGCCGT TTAAACGTTG TAATGGAAGC CTACCCAGAC CTCAAAGCCA ATACCAATAT GGCACAGCTT TCTGAAGAGC TCACCAGCAC CGAAAACAAA GTAGCATTCT CTCGCCAAGC GTTTAACGAT TCTGTGACCG AATACAACTC TTACCGTCAA AGTTTTCCGC CTGTATTTTT CGCCGCCAGC TTTGGTCACG GCAAAGATGC AGAGCTACTA GAATTCGCCG ACAGCGAAGC GATCCAAGCG GCGCCTAAAG TTTCTTTTTA A
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Protein sequence | MTTLIVLGVL VLLFFYVVSI YNRLVSLRNR YQNAFAQIEV QLKRRYDLIP NLVETAKAYM SHERETLEAV ISARNGAISS LKTAAGNPGD AGAMQGLAGA EGILSNALGR LNVVMEAYPD LKANTNMAQL SEELTSTENK VAFSRQAFND SVTEYNSYRQ SFPPVFFAAS FGHGKDAELL EFADSEAIQA APKVSF
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