Gene Sde_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3150 
Symbol 
ID3965584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4025769 
End bp4026359 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content48% 
IMG OID637922247 
Productdivalent cation transporter 
Protein accessionYP_528619 
Protein GI90022792 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTT TAATCGTTCT TGGTGTACTC GTATTACTCT TTTTTTACGT AGTTTCTATC 
TACAACCGTT TAGTAAGCCT TAGAAATCGC TATCAAAACG CTTTTGCCCA AATAGAGGTG
CAACTCAAGC GCCGCTACGA TCTTATCCCT AACCTTGTAG AAACCGCAAA AGCCTACATG
AGCCACGAGC GCGAAACACT CGAAGCCGTA ATAAGCGCAC GCAACGGCGC AATAAGCAGC
CTTAAAACTG CTGCGGGCAA CCCCGGTGAT GCAGGCGCAA TGCAAGGGCT TGCCGGTGCA
GAGGGTATAT TATCCAACGC GTTGGGCCGT TTAAACGTTG TAATGGAAGC CTACCCAGAC
CTCAAAGCCA ATACCAATAT GGCACAGCTT TCTGAAGAGC TCACCAGCAC CGAAAACAAA
GTAGCATTCT CTCGCCAAGC GTTTAACGAT TCTGTGACCG AATACAACTC TTACCGTCAA
AGTTTTCCGC CTGTATTTTT CGCCGCCAGC TTTGGTCACG GCAAAGATGC AGAGCTACTA
GAATTCGCCG ACAGCGAAGC GATCCAAGCG GCGCCTAAAG TTTCTTTTTA A
 
Protein sequence
MTTLIVLGVL VLLFFYVVSI YNRLVSLRNR YQNAFAQIEV QLKRRYDLIP NLVETAKAYM 
SHERETLEAV ISARNGAISS LKTAAGNPGD AGAMQGLAGA EGILSNALGR LNVVMEAYPD
LKANTNMAQL SEELTSTENK VAFSRQAFND SVTEYNSYRQ SFPPVFFAAS FGHGKDAELL
EFADSEAIQA APKVSF