Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3080 |
Symbol | |
ID | 3965423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3933133 |
End bp | 3934179 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637922177 |
Product | serine/threonine protein kinase |
Protein accession | YP_528549 |
Protein GI | 90022722 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTAATA CAACGAGAAC TGCAGAATTG AGCTTTCACA TACGGCATGA AATTGGATTA GAAGGTAAAA ACTCTACTGT TTTCACTGCA ACAGATTTAC AACTGAATGC TGAAATAGTT GTAAAAAAAA TGCTTAAGTC AGACTTTTCT GATGTGAATG AATATTTTAA AGAAGCCAGC CTATTACATC TAAGTAGTCA TCCTAATGTT GTCCCTATTT ACTATGCCTG CCAGGATGAT GATCATATCT TTCTTGCAAT GCCCTATTTT GAACTTGGTT CTCTTAAAAA AAGAATAAGA GAATCCCCTA TTAGCGTTAG GGAAATTATT ATTTGGTCCA CACAAGTGCT GAGTGGGTTG CACAATATCC ATTCTAAAAG ACTGATCCAC TTTGATGTGA AGCCAGATAA TATTCTGTTC TCAAAGAGGG GGGAGGCACT ATTATCGGAC TTTGGACTTA CAAAACAAAC TACGTTCAGT GGTGTTGCTG GTCAAGATAG AATATATGGC AATATGGTGC CTCCCGAGGC TTTTAGTACT CAAAACTTTA ACAATCAGTT TGATATATAC CAATTCGGAC TGACGCTTCA TAGAATGTGT GTTGGGGATG ATATTTTTTA TGCTGAATAT GCTACTTTTA TAGAAGGTGG CGACCTCAAT CGTCATAGGT TTAGGCATGC GGTTGTAAAT GGGCAATTTC CAAATAAAAA CGATTACCCT GAGCACATAC CGCAAGCTTT AATTAATACG ATAAAAAAGT GTTTGGCTAC AGATTTGAAA GAAAGATATG TTTCCGCTGT AGATGTAGTT AATGACTTGT CAAGTATAGA CGGTGAACTT CTTGATTGGA GCCTGTCTTA TGATGGTGCA AACAGAACGT GGCACAAAAA TGCCACTGAC GGGCGCGTAT TCGATCTAGT AGTTGACGAG AATGGGAGTT CAGAGGCCAG GAAAACTTCA GCTGGGGGAA ATACCCAAAG AATAACAGAA TACTGTAAGC CACAGATAAA CAGATCAGAG ATTAAGCGCT TCCTTAGGAG GTACTGA
|
Protein sequence | MLNTTRTAEL SFHIRHEIGL EGKNSTVFTA TDLQLNAEIV VKKMLKSDFS DVNEYFKEAS LLHLSSHPNV VPIYYACQDD DHIFLAMPYF ELGSLKKRIR ESPISVREII IWSTQVLSGL HNIHSKRLIH FDVKPDNILF SKRGEALLSD FGLTKQTTFS GVAGQDRIYG NMVPPEAFST QNFNNQFDIY QFGLTLHRMC VGDDIFYAEY ATFIEGGDLN RHRFRHAVVN GQFPNKNDYP EHIPQALINT IKKCLATDLK ERYVSAVDVV NDLSSIDGEL LDWSLSYDGA NRTWHKNATD GRVFDLVVDE NGSSEARKTS AGGNTQRITE YCKPQINRSE IKRFLRRY
|
| |