| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3033 |
|---|
| Symbol | |
|---|
| ID | 3967697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3874727 |
|---|
| End bp | 3875182 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637922130 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_528502 |
|---|
| Protein GI | 90022675 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1671] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0170362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000251302 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTGT GGGTAGATGC GGACGCCTGT CCAAATATGA TCAAAGAGGT GCTTTTTCGC
GCAGCTCAAC GCCGTAAGGT ACAGGTTACA CTGGTAGCCA ACCAACCGCT TAAGGTTATT
CCATCGCCGT TTATTAAAGC TATACAGGTA TCTGCAGGCT TTGATGTTGC CGATAACTAC
ATAGTCGAGC AGGTGGAAGC CGGTGATTTG ATAATAACGG CCGACATCCC CCTCGCCGCC
GAGGCAATAG AAAAGGGCGG TTTAGTGATT AGCCCAAGGG GCGAGCTACT TACCGCCGAA
AATATACGCC CGCGCTTAAA TATGCGCGAC TTCCTAGAGC AAATGCGCTC CTCCGGCGAA
CACACCGGCG GCCCTGCCGC GTTGACAGCG AACGATAAGC AAGCCTTTGC AAACGCTTTA
GATAGATTGA TAACAAAGGG GTTGAAAGAT AGTTAA
|
|---|
| Protein sequence | MRVWVDADAC PNMIKEVLFR AAQRRKVQVT LVANQPLKVI PSPFIKAIQV SAGFDVADNY
IVEQVEAGDL IITADIPLAA EAIEKGGLVI SPRGELLTAE NIRPRLNMRD FLEQMRSSGE
HTGGPAALTA NDKQAFANAL DRLITKGLKD S
|
|---|
| |