| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3001 |
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| Symbol | |
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| ID | 3967762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3825424 |
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| End bp | 3826536 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637922098 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_528470 |
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| Protein GI | 90022643 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000271978 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTTTTT TCCCTAAACA ACAACGATTT TGGCTATACC ACGCAGCGGG TGTAGGGGTT
GTATTCTTAT TCCAGCTCGT CGCATTCTTA ATGCGCGAAG ATTTTGTAGA AATGAATGTG
ACGGCGGCTT TTATTTGGCT GCCTCTGTTT ACCCTCGCTG TACTTGTTTT TCGCACCCTA
TATGCGCGCT ATAACGGCGC CAATATGGGT ATGGGTAAAC TTATTCCTAT TGCTTTAATC
TATGGCTTGG TAAGCGGGCT TACAATAACC ACACTTATAT TTTTAGCGCT GTTACCTGGC
TTTGGCGATG AGCTGTTTAA CCCAGAAACG CTTGCAAGTA TTGGTATTAG CGAAACCGAA
ATGTTAGTTA ACTTTTTTAT CAGCAATACC TTTATACAAA TGTTGTACAT GAGTGGCTGG
ATATTTATTT ATACATCTAC AGTGGCAAGC CGCAGGGCGA AACAGTCGGA GCTAGATAAC
CTTAAGTTGC AAAACAACCT GCGTGAATCA CAGCTTAGTA ATTTAGCGAA TCAGCTTAAC
CCACATTTTC TATTTAACTC TTTAAATAAT ATTCGATTTG TTATTCACGA AAATCCTAAT
CATGCAGATG CAATGGTAAC GGCTTTATCA GAAATACTCC GTTATTCACT TGCCAGTACA
AGTAAGCCTA AAGTAACTCT CGAAGAAGAG CTGGGGTTTA TAGAGCGCTA TATAGCGATA
GTTAAATTGC AGCTAGAGGA TAGGTTGCGG TTTAATTTGA ACGTGAGTTC GCAACTAAAG
CATTGCTTAG TACCGCCTAT GATTTTGCAG CTATTAATAG AAAACGCTGT AAAGCACGGC
ATGGAAAACT TGCCCAGTGG TGGCGATTTA GATGTAACCG TAGCAGAACT AAGCGGCAAG
TTGAGCGGTA AGTTAAGCAT TGTGGTTACT AACCCTATAC CTGTTTCAAA AGCCAATGCA
GATGGCACAG GCACAGGGTT AAAAAATATT CAGCATCGTT TGCAGTTGCT GTATGGCAGT
AACGCAAGTA TCAAGCTAGA ACCTAGCGCC ACCCATTTTA CCGTTCACTT AATTTTACCT
ATTGAGAAAA ACGATGAAAG CACTCATTAT TGA
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| Protein sequence | MAFFPKQQRF WLYHAAGVGV VFLFQLVAFL MREDFVEMNV TAAFIWLPLF TLAVLVFRTL
YARYNGANMG MGKLIPIALI YGLVSGLTIT TLIFLALLPG FGDELFNPET LASIGISETE
MLVNFFISNT FIQMLYMSGW IFIYTSTVAS RRAKQSELDN LKLQNNLRES QLSNLANQLN
PHFLFNSLNN IRFVIHENPN HADAMVTALS EILRYSLAST SKPKVTLEEE LGFIERYIAI
VKLQLEDRLR FNLNVSSQLK HCLVPPMILQ LLIENAVKHG MENLPSGGDL DVTVAELSGK
LSGKLSIVVT NPIPVSKANA DGTGTGLKNI QHRLQLLYGS NASIKLEPSA THFTVHLILP
IEKNDESTHY
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