Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2920 |
Symbol | |
ID | 3968049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3704150 |
End bp | 3704797 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637922017 |
Product | oxidoreductase |
Protein accession | YP_528389 |
Protein GI | 90022562 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3751] Predicted proline hydroxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCCTC CCATAGAAGC CTTACCACTT AATAAGCAGC AAACACTACT GGACGACATA GCCATGCAGT TGCGCGTGCA AGGGTATAGT ATTAATGCCG AAGCCGTGCC TGCATCCTTG GCGCACGCCC TATACCAGCA AGCGAAAAGA GAGCAGCTTC GCCCTGCGGG CATTGGCCGG CAGCAATCCC ATGCGGTTGA TCGCAGTGTA CGCAAAGATA GCATTAGTTG GATAACGGCA GAATCTGCCG CAGGAGCAGA GTGGCTTGCG TGGGCCGACA GCTTAAAGGT GGCGCTTAAT AGGCAGCTAT TGCTGGGGTT GTTTTCCTTT GAAAGCCATT TTGCCCACTA CCCGCCAGGG GGCTTTTATA AAAAGCATGT GGATGCCTTT AAAGGCGAGG CCAACCGGGT GTTGTCGATG GTGGTGTACC TAAACCCTCA ATGGCGCGAT GAGGATGGCG GCGAGTTGGT TATTTACCTT GAAGATGGCA GCAGCGTGAA AGTAGCGCCG CGCTTTGCTA CCTTGGTTAC CTTTCTAAGC GAAGAGTTCC CACATGAAGT ACTGCCTGCT AAAGCCGACC GCTATTCCAT TGCTTGTTGG TTTAGGATGA ACTCGTCCCA TGCTGGCAGG GTGGACCCAC CTCGTTAG
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Protein sequence | MIPPIEALPL NKQQTLLDDI AMQLRVQGYS INAEAVPASL AHALYQQAKR EQLRPAGIGR QQSHAVDRSV RKDSISWITA ESAAGAEWLA WADSLKVALN RQLLLGLFSF ESHFAHYPPG GFYKKHVDAF KGEANRVLSM VVYLNPQWRD EDGGELVIYL EDGSSVKVAP RFATLVTFLS EEFPHEVLPA KADRYSIACW FRMNSSHAGR VDPPR
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