| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2888 |
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| Symbol | |
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| ID | 3968056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3661542 |
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| End bp | 3662402 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921985 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_528357 |
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| Protein GI | 90022530 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0357518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0034345 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAAA ATAAACCTTA CTGCGAACCG TTTTGTATTC AGCAGGGCTA CAATTTCGAG
GTTCATCACG TAAGTTACAG CGATAACGAT CCCTACTCGT GCTTTATGCA TTTTCACGAA
GTGCATGAGC TAATTGTATT CGAAAAAATA GAGGGGACCT TTTTCTACAA TCAAGGCGAG
TCGTCACTGC AAGATTACGA CATGGTGTTT ACCCCAGCAC TAGAAACACA CGATTTCGAG
TTATCTAGCC GGCAAAAATC GTGGCATATT ATTCAGTTTT TACCTTCCTT TTTAGCCGAC
AATGGGCTGG CTTCGGCGGA ATCGTTTTTT AAGTACGGTA TGCATCTGCG TTTAAACGCC
TGTGATTCTA AGGATATTCA TCGTGTTGTA ACGTGGCTGC ACGAAAGTTA CAGGCGCGAC
CCCTACAGCG ATAAAAGCCA ATCGTTATTG CGTTTGTTAC TCACTTGGCT GGCAGAAAGT
GCCTCGCCAT TAAAGTCGCC CCATACCGAA GCCATCCAAA ACTCAAGCAG CTATGCTAAG
TTAGAACCTG TTGTAAACTT ATTTCGCCAT CAAAAAAGCG TCGAGCTCTC ACTTAACGAG
GCGGCTGCAA TGTGTTGCCT TTCGCCATCT TATTTTTCAC GATTGTTTAA GAGCGTGTTT
CGCTATAACT ACTCGGAATA TAGTATTCGC CACCGCCTAT ATAGTGCCGC TAGAATGCTA
AGCCAGAGCG AATTCTCTAT TACAGATATT AGTTACGAAC TCAATTTTTC TAGCCCCTCT
CACTTTATTG CACTGTTTAA AAAGCAGTTT GGTGTTACCC CTAAAAAGTA CAAAACTACA
ATTAAAGAGC GTTTGCTATA G
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| Protein sequence | MKKNKPYCEP FCIQQGYNFE VHHVSYSDND PYSCFMHFHE VHELIVFEKI EGTFFYNQGE
SSLQDYDMVF TPALETHDFE LSSRQKSWHI IQFLPSFLAD NGLASAESFF KYGMHLRLNA
CDSKDIHRVV TWLHESYRRD PYSDKSQSLL RLLLTWLAES ASPLKSPHTE AIQNSSSYAK
LEPVVNLFRH QKSVELSLNE AAAMCCLSPS YFSRLFKSVF RYNYSEYSIR HRLYSAARML
SQSEFSITDI SYELNFSSPS HFIALFKKQF GVTPKKYKTT IKERLL
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