| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2835 |
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| Symbol | |
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| ID | 3968179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3582947 |
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| End bp | 3583987 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921932 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_528304 |
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| Protein GI | 90022477 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.157532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.231861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTTG CTTCCTACTT AGTCACCCTG AGTATTCTCT CGTTTTGCGC TTGGCTAGAC
CTGGTCGCCT GGCAAATACC TTTTCATTTT TTTGTCAGTT TGGTTGTTAT TAATGCCGTA
TTCTTTTATC TAATATACCG CGGTTACAAC TTGCGCTGTA AAGACCATAG TATGACAGCA
GCGCAAATGA TCGTATCTCT GGTCCCAACG CTTTATAGCG TCTATTTTCT AGATTTAGGG
CAAGCACGCG CGTCTTTCCT TGTGGTAGCG ATTGTGCCCC TGCTTTACGG CATGCTGGCA
CTTACAACCC GTACTTTTCT CCAAATTGGC ATATTGTTTA TAGCTTTATA CATACTGATG
ATACTTCTCA TTAATAAAAA TAGGCCCGAT TCAATCAATC CAACCATGGA GGTATTACAG
GCTTTTGCCT TAATAGTTGT AGTCATTCAA ATCACTATCA TCGGCGGGTA CATTAGCGGC
CTAAGAAGTA AACTACGCAA TCGCAACAAA GAACTAAATA TTGCCTTAGT TAAAATTAGC
GATATGGCAA ACCGCGATGA ATTAACTGGC ATAGCCAATA GGCGTAAAAT ATTTGAAGTA
CTGGATACAG AAGTGAAGCG TAAGCGTGAG CCGAATACCG CTATCGGTAT CTGCATACTA
GACGTCGATC ACTTTAAACG CATTAACGAT ACCTATGGAC ACCAAGCGGG CGACGAAGTA
CTAAAACGCA TAGCAGAAGA AGTACCCAAA TCACTACGCA CAATGGATTG TTTTGGCCGA
TATGGCGGTG AAGAGTTTTT ACTCATTCTA CCTAGCACCT CTCTCGAAGG AACTGAAATT
AAAGCAAACA GGGTAAGGGA AGAAGTTGCT AAGCTAGAGT TTAAAAACCT ACCACCGGGT
GAAAAAGTTA CAATATCTAT AGGTATTGCG GAGTATTTTC CTGAGGAAGA AATAGACGCC
ACTATTCAAC GTGCCGATAA AGCGCTATAT GAAGCTAAAG CCCATGGTCG CAACTGCTGC
GTTGTGCACC CTTCTCCTTA A
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| Protein sequence | MSVASYLVTL SILSFCAWLD LVAWQIPFHF FVSLVVINAV FFYLIYRGYN LRCKDHSMTA
AQMIVSLVPT LYSVYFLDLG QARASFLVVA IVPLLYGMLA LTTRTFLQIG ILFIALYILM
ILLINKNRPD SINPTMEVLQ AFALIVVVIQ ITIIGGYISG LRSKLRNRNK ELNIALVKIS
DMANRDELTG IANRRKIFEV LDTEVKRKRE PNTAIGICIL DVDHFKRIND TYGHQAGDEV
LKRIAEEVPK SLRTMDCFGR YGGEEFLLIL PSTSLEGTEI KANRVREEVA KLEFKNLPPG
EKVTISIGIA EYFPEEEIDA TIQRADKALY EAKAHGRNCC VVHPSP
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