Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2765 |
Symbol | |
ID | 3968361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3500334 |
End bp | 3500711 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637921865 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_528237 |
Protein GI | 90022410 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.183145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00416303 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGCGT TAATACTTCA CAGCAAAAAC ATAGCGCTAG CTTTTGGTTT TACATTTATT GCAGTTGCGC TTTTAGGTTT TGTTCCTAAT CCCTTGGTTT CTCCGCATGG CGTATTTGCG GTGAATCTGG CTCATAATTT GGTTCATCTA CTTACAGGTG TTGCCTTTGT TGCTGGGGTT TATCTGTTTA GAGGAAGGGA ACACAAGGTC ATACTCGTGC TAGGCGGGCT ATATTTTGCC GTTGCAATAC TGGGTTTCTT CACCAAAGGT GACATGCTAT TGGGCATTGT GCATATTAAT GAAGCCGACC GTTGGTTGCA TCTTGGTCTC GCGTTAGCGA TATTGGTGTC GGGTATGGTT TTTAAATCAT CAAAGTAG
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Protein sequence | MTALILHSKN IALAFGFTFI AVALLGFVPN PLVSPHGVFA VNLAHNLVHL LTGVAFVAGV YLFRGREHKV ILVLGGLYFA VAILGFFTKG DMLLGIVHIN EADRWLHLGL ALAILVSGMV FKSSK
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