| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2598 |
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| Symbol | |
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| ID | 3968648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3293022 |
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| End bp | 3295097 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637921696 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_528070 |
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| Protein GI | 90022243 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0582843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAATA AAATTAATTT TAAAAGTCGA GCAGCGCTAT TTATATTGTG TGGTGTGCTG
CTTGGGGGTT GTGGCGGCAG CAGTGGCGAT GGCGAAGATA CAAGCCCAGA TTCTTTTGCG
TTTGATGATG AAATAGATGC GCCACTGGCG CAGTGGTATC TCTCTGACGA AATTGAAGTG
GAGGGAGTTA ACGCCGAAAC GCCAATTAGT ATTGTGGGTG GTGAGTATTC GATAAATTAT
GGTGACTTTA CCGATGAAGA CGGTTCAGTA TACGAGGGCG ATATAATTAT TGTGCGCGTT
TTTACCGCAG ACACAATTGA TACCGAAACC GAGCTCACGC TAACCATTGG TGATGAAGAC
GATACTTTTA CTGTTCGCAC GGCTGAGGTT GTGTTGCGAG CGAAAGATGC ATTTAAAAAA
TTAACGTTCA GTTGGGATAG CGTCGACGGT GCCGATTATT ATCGCCTGCT TGAAAAAGCT
CATGCAGGTG AAGAGTTTGA GCAGGTAGGG CGGGATTTGG AGTCTACCTC AATTGGTTTG
ACGCTAGATG TGCCTATCCA TCGTTTAGAT TGGCTTAATG CCGAATACAA GCTGCAAACC
TGTACCAATG CCGAATGTTC AGAGTCCGAT GCTATTTCTG TTTACAGCTA TATGAAGCGT
TCGATTGGTT ACTTTAAAGC GAGTAACCCC GAAAGCTACG ATAGGTTTGG GCGTGTGGCG
TTAAGCGCCG ACGGCAAAAC CTTGGCTGTA GCCGCGCCTG GCGACGACAG TGCTGCAAAG
GGTATAGATG GCGATGATGG TGATAACTCG GTAAGTGGCA GTGGCGCAGT TTATGTGTAT
GTGCGCGATG ATGGTGAATG GCGTTTTCAG GCTTATATCA AGGCGTCAAA CACTGGCGAG
GCGGATGCTT TCGGACGCGC ACTGGCCTTA AGTGACGATG GCAACACGCT TGCGGTTGGC
GCGCCTTTCG AAGATGGCGC CAGCGCAGGC ATTGATGGCG ATGGCTTAAG TGATGCTCTG
CAGGATAGTG GTGCCGTGTA TGTATTTCGT CGGGCGGGAG ATGCTTGGTC GCAACAAAAC
TATATAAAAG CTTCAAACCC TGCGGTTAAC GACAACTTTG GCTCGGCATT AGCGCTAAGT
GATTATGGTG GCACGCTGGC AGTGGCGGCG CCTGGGCAGG ATAGCTCCGC CGTTTTGGTT
GGGGGTGATG AAGTCGATCA GCTTGCGGCC GACTCGGGCG CGGTTTACGT GTTTAGCTTA
AATGCAGATA ACTGGCAGCA GCAGGCTTTT ATCAAAGCAT CTAACACCGG CGCTGGCGAC
GGTTTTGGTG GTCGCGTTGC GCTAAGTGCT AATGGTAATT CTTTAGTTGT TGGGGCCCCT
TACGAGCAAT CGTTGTTTGC TGGTCAGCCT GCAGATAATA GTGCGGCAAA TGCCGGTGCA
GCCTATGTTT ATGGTCGCGC ATCCGGCAGC TGGTCGTTTA AAGCCTATTT AAAGGCATCG
AACGCCCAGT CTGATGGTCG ATTTGGCTCG GCCGTAGCTA TAGCAAATGA TGGCGCCACA
GTGGCAGTGG GTTCTGCGGG TGAAGCGAGT ATTGCAATAG GTGTAAATGG CAACCAGTTA
GATCGCTCAA ATGCAGAATC GGGTGCGGCC TATGTGTTTA ATTTAGAGGG CGATGCATGG
GTGCAGCACA GCTATATAAA GGCCTCTAAT GGCGATATTG GCGACCTTTT TGGGTCGGCC
ATTGCTTTGA ATGCCGCTGG GTCGTTATTG GTGGTGGGTG CGCCGGGTGA GTCAAGCGCT
GCCGAGGGGG TAAGCGGAAC TCAGCCTGAT AACAGCGCTA CAGATGCGGG TGCCGCTTAC
GTGTTTGAAC TGAGCGCGGG GGCTTGGAGT CAGTTAAAGT ATGTTAAAGC CTCGAATGCG
GAGGCGGCCG ACGGGTTTGG CTCATATGTC TCGCTGGATG CGTCAGGCGA TGTGTTGGCA
GTAGGTGCGC CAGAAGAGCG AAGCAGTTCC ACGCTATTTT CCAACCTGCA AACAAGTAAT
GCGCTGAATG CAGCTGGCGC TGTGTATTTG TATTGA
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| Protein sequence | MFNKINFKSR AALFILCGVL LGGCGGSSGD GEDTSPDSFA FDDEIDAPLA QWYLSDEIEV
EGVNAETPIS IVGGEYSINY GDFTDEDGSV YEGDIIIVRV FTADTIDTET ELTLTIGDED
DTFTVRTAEV VLRAKDAFKK LTFSWDSVDG ADYYRLLEKA HAGEEFEQVG RDLESTSIGL
TLDVPIHRLD WLNAEYKLQT CTNAECSESD AISVYSYMKR SIGYFKASNP ESYDRFGRVA
LSADGKTLAV AAPGDDSAAK GIDGDDGDNS VSGSGAVYVY VRDDGEWRFQ AYIKASNTGE
ADAFGRALAL SDDGNTLAVG APFEDGASAG IDGDGLSDAL QDSGAVYVFR RAGDAWSQQN
YIKASNPAVN DNFGSALALS DYGGTLAVAA PGQDSSAVLV GGDEVDQLAA DSGAVYVFSL
NADNWQQQAF IKASNTGAGD GFGGRVALSA NGNSLVVGAP YEQSLFAGQP ADNSAANAGA
AYVYGRASGS WSFKAYLKAS NAQSDGRFGS AVAIANDGAT VAVGSAGEAS IAIGVNGNQL
DRSNAESGAA YVFNLEGDAW VQHSYIKASN GDIGDLFGSA IALNAAGSLL VVGAPGESSA
AEGVSGTQPD NSATDAGAAY VFELSAGAWS QLKYVKASNA EAADGFGSYV SLDASGDVLA
VGAPEERSSS TLFSNLQTSN ALNAAGAVYL Y
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