| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2353 |
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| Symbol | |
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| ID | 3967386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2979615 |
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| End bp | 2981798 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921444 |
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| Product | assimilatory nitrate reductase (ferredoxin) precursor |
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| Protein accession | YP_527825 |
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| Protein GI | 90021998 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.895801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.416805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTTG GTCGTAGAAA AAAGAATCCA ATCGTCATTA GAGATAAGGG CGTAACCGAG
TGGAAATATG CCACTTGCGG TTACTGCTCT GTAGGTTGCT CTATAGAAAT TGGCGTAAAT
AAAGAGGGTA CACCTGTTAC TACCCGCGGT GTGGGTGGGG CAGATGTAAA CCGAGGTAAG
CTCTGCATTA AAGGGCTTAC CGAAGCGCAA ATATTCCAAG CGGCTGGCCG TGGGGCAGAG
CCAAAAATTC GAAATAAAAC ATTCGAAGAT TGGCAAATAA CCGATTGGGA TACAGCGCTG
GATAAAACCG CAGCAGAATT CAAACGTATC CAAGAAAAAT ACGGGCGCGA TTCTGTAGCT
GTTATTTCTA CCGGCCAAAT AATGACCGAA GAGTTTTACA CTCTAGGTAA ATTAGTGCGT
GGTGTTATTG GTACCAACAA TTACGATGGC AACACCACAT TGTGTATGGC GTCTGCGGTA
TCGGGCTACA AGCGTTCATT TGGGTCCGAC GGCCCTCCAG GTTGTTACGA AGATTTCGAG
CACACCGATT GCTTGTTAGC GTTTGGTTCG AACCTGTGTG AGCAGCACCC CATTATTTAC
TGGCGTTTAA AAGAAGCGCT AGAAAAACGT AAATTCCCAG TAATTGTTGT CGACCCGCGC
GTAACCATGT TTGCGCAATT TGCCGATATT CATTTGCCAA TTACACCAGG TACAGACTTG
GTGCTATTAA ACAGCTTGGC ACATGTAATA TTAAAAGAGG GCCTAGCAGA CCAAGAATAT
ATAGAGCGTT GCTGTAGCGG TTACGAAGAC TTTGCTGCAG AAGTAGAAAA GTTTGATCCA
ACATCGGCCG CAAAAATTTG TGGTATTGAT GAAGACACCA TTCGTCACGT TGCGCGCTTA
TATGCAAAAG CTGGCGCGGC TATGTCTATA TGGACAATGG GTATCAACCA ATCTACCCAC
GGTTCCGACG GTGTGTGCGG TATTAATAAC CTTAACTTAA TTACCGGCAA TATAGGCAAG
CCCGGCGGTA CTAGTTTATC TATTACTGGT CAGTGTAACG CGATGGGCAC GCGTGAGTGG
TCTTCGTGCT CTGGCTTGCC TGGTTACCGC GCGCTAGAAA ATGCCGAGCA CCGCGAAGAA
ATAGGCAAGT TTTGGGGCGT AGACCCAGAG TTCTTCCCTA AAAAGCGCGG CTTGTTCCAA
ACGGATATTT TTCCCGCTAT CGAAACCGGT CAAATTAAAG CGTTATGGGT GGTTGCAACA
AACCCAATGA CCTCTATGCC TAACTCTGCG CGTATTCGTA AAACCATGGA GAAACTAGAG
TTTTGCGTAG TGCAAGATTC CTACGAAGAC GTAGAAACCG CGCAATACGC GCACGTGTAT
TTACCCGGCT CGGTATGGGC AGAGAAAAAA GGCTGTTTTA CTAACACCGA GCGCCGCGTA
AACATTACTA CACCGGTAAT GGCGCCGTAC GGTAACTCCA AGCCAGATGT GTGGATATTC
TCGCAAATGG CAAAACGTTG GGAGCAGGGC GCGAAAATGA GCTTCCCGCT AGACACTGCC
GATGTGTTTG ATGAAATGAA ACAGTTATCC AAGGGTGATC ATCGCATATT GGATATATCT
GGTATGAGCC ACGAACTAAT CGAGCAAAAG CGCGGTATTC AATGGCCAAT GCGCGAAGGC
GATAGCGAAG GTACACAGCG CTTATACGCC GACGGCAAAT TCTGTTACCC AGACGGCAAA
GCAAAATTAA TGGCCATGCC TTGGGTGGAT AACAACGAAG TACCCGACGA AGATTATCCA
TTTTGGATGA ACAGTGGTCG CGTGGTTGAG CATTTCCATA CCCGAACTAA AACGGGCAAG
GTGGGCAACT GTAATAAATT TAGCCCAACC CCATATATGG AAATGAACCC AGATGCTGCC
GAAGAGTTGG GCATAAAGCA TATGAGTTAT GTGCGTTTGG TATCGCGTCG TGGTGATGCC
GTGGTAATGG TGCAATTAAC TCATCGCGTA GCATTCAACG CAGTGTTTAT TCCATTCCAC
TTCCACGATT GTGTAAACCG TTTGTCTCTT GGCTTGCTAG ACCCATACTC GCGTCAGCCA
GCGTTTAAGC AGTGCACTGT TCGCATTGAG CATGTAGACC AAAAAGAAGC GGCCAAACTA
AACGTAGAAA TGCGTGCATT CTAA
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| Protein sequence | MLFGRRKKNP IVIRDKGVTE WKYATCGYCS VGCSIEIGVN KEGTPVTTRG VGGADVNRGK
LCIKGLTEAQ IFQAAGRGAE PKIRNKTFED WQITDWDTAL DKTAAEFKRI QEKYGRDSVA
VISTGQIMTE EFYTLGKLVR GVIGTNNYDG NTTLCMASAV SGYKRSFGSD GPPGCYEDFE
HTDCLLAFGS NLCEQHPIIY WRLKEALEKR KFPVIVVDPR VTMFAQFADI HLPITPGTDL
VLLNSLAHVI LKEGLADQEY IERCCSGYED FAAEVEKFDP TSAAKICGID EDTIRHVARL
YAKAGAAMSI WTMGINQSTH GSDGVCGINN LNLITGNIGK PGGTSLSITG QCNAMGTREW
SSCSGLPGYR ALENAEHREE IGKFWGVDPE FFPKKRGLFQ TDIFPAIETG QIKALWVVAT
NPMTSMPNSA RIRKTMEKLE FCVVQDSYED VETAQYAHVY LPGSVWAEKK GCFTNTERRV
NITTPVMAPY GNSKPDVWIF SQMAKRWEQG AKMSFPLDTA DVFDEMKQLS KGDHRILDIS
GMSHELIEQK RGIQWPMREG DSEGTQRLYA DGKFCYPDGK AKLMAMPWVD NNEVPDEDYP
FWMNSGRVVE HFHTRTKTGK VGNCNKFSPT PYMEMNPDAA EELGIKHMSY VRLVSRRGDA
VVMVQLTHRV AFNAVFIPFH FHDCVNRLSL GLLDPYSRQP AFKQCTVRIE HVDQKEAAKL
NVEMRAF
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