| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2004 |
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| Symbol | |
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| ID | 3967247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2521187 |
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| End bp | 2523994 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637921092 |
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| Product | DNA helicase/exodeoxyribonuclease V, subunit B |
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| Protein accession | YP_527476 |
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| Protein GI | 90021649 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03623] probable DNA repair protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACAGA CGCTTCAGGA TTGGTTGACC AATTTAGCCA ACAAACAAGA TGTACATGCA
GACGAGCTAC TGGTAACTGC AAACCAACGC CTATCTCGTC ATATTTTACG GTTGCGCCAA
CTGCAGCTAG GTGTACCTGT ACTTCCCAAT CAAAATATTG CTTCTTATGA ACAGTGGCGC
TCAAATCTTT GGTCGCACTG TGAAGACAGA GGCTGGGTAG AAAGTACAGT AATTAACAAG
CAGCAGGAGC AGTTTATATG GCAGCAGCTG CTTTCACAGA GCAATCAGAC TGAAACATTA
CTAGCAGATA ACAAGTCACT CGCAAAAGCG CTTACCGATG CACGTATTAT TGTCGATACT
TGGGGCATTC CACACGACCA AATAGAGAAT GCCAATCACC GAGAGTCGAG CTTCTTTCTA
GAAGTTCGTA CCAGCTTAAG TAGTTTGTAC CAAGATAAAG GCTGGATAAC GCCCGAGCAG
CAATCGAATA AACTTATCGA TCTATTCAAT ACCGGTACAC TAAAAAAATA CAGCGATATA
GGATTATATG GGTTCACAGA ACTAAACCCT CTACAGCAAG CACTAGTAAC AAGTGCTACT
AATAATGTAC AACAACTACC TATTGAAAAG TGTGATCAAG CTTCGGCAGG GCTAATAGAA
TGTGTTGATT GGGAAACAGA AATAGAAACT ATCGCCCGCT GGGCGCACCA AACCCTTAGG
CAAAACCCTT CTACACAAAT AGGTATTGTG ATTCCCAATC TTCAAAAGCA CCGCTCGCAA
ATAGAGTGCG CATTTATTCG CCAGTTTGAT AACGATTATC TACTCAACCC TACCTCATCT
GGCGCAGATA AGCCTTACGA GCTATCTATT GGTAGCCCTC TAGCCGAAGA GCCTTGTATA
GCCGATGCAC TTCTGCTTAC CCAGCTACTT CATAAAAAAC TAACTAAAGA AGAAGCGTTA
GATCTCATCC GCTCTGAGTT TTGGGGGCAA AACACTGAGG CACGGCTACT TGCCCTGCAA
GGCTTAAATG ATTGGCCGAT GACAAGCGTC GACACTATTC GCCTTACAGA GTTACTTAGT
AAAGCTGAAA AAAGAATTGA AACAGCCAAT GACTTAAATA AAGAGCAATT TAAAGATGGC
TTTATAGAAG CCACTGATGA GATGACCACC TCAAACAGAA TCCTTGAGGC AATACAGCTG
TACAGGCTGG CGGCACATAA ATTAGATTTT CAACATTGGA ACGGCTTTTT AAAACGTTTT
TTAAAAACTC TAAACTGGCC TGGCAACAGA ACCCTGAACA GCAGAGAGTA TCAGGCTGTA
GAGCAATTTA AACTTATACT CGATGAGTTG CTGGTAGATC AGCGATGCTT CATTGGGTCC
AATTTGGTTA CCTTTCCCGC GTATGTCGCG CACTTGCGGC AACGCCTAAG TGAAAAAGTA
TTCCAACAGC AAACACCGCG TAAACCCATT CAAATATCGG GTACGCTAGA AGCCATTGGT
TTAAGCTTCG ACAAGTGCTG GGTTGCAAAC ACAACAAGAA GTCAGTTTCC TGAGTCGCCA
CAGCCTAATG CCTTTTTACC CCTTGCATTG CAAAAGGCTT TTGCAACACC GCGCAGTTCG
CCGCAAAAAG AATTGGATTA CGCGGAACAG TTACTGACAA TATTCAGCGA ATGTGCCAAT
GAGGTAACGT TTAGCTACAG CAAGACAGCC GAAGACGAAC ACCAGCAGGT GTCGCCCCTG
TTGCCACCAA TGGCAAGTAA AAAATTAGAT GAAGAGCAGC TAGCCAAAAA CCTTTATTTC
GATAAGTACA ATACAGCGAG TGCATACCGA AACTTCTCTG TTTTTAGTGA CTTATGCGGC
TTACCATTAA AGCATTCAGA AGCCTCAATA AAAATACGGC GAGGCGTTAA CGCCTTAAGT
ACCTACGCAG TAAACCCTTT ATATGCCTAT TTAGTACATC GTTTAGGGGC CAAACAGCCC
AACCCTGTTT ATGTGGGAAT CTCTCCTCCG CAGCGGGGTA ATATTTTGCA CAACGTACTA
GAAACTTTTT GGGAGGCCAC CAAAAATAGT GCCGCACTAA AAACGAAACT AGAAAATCAA
GCGGCGTTCT TAGCTGAACT CGAAGCACTG ATAAGCGACA ATGTAAATGC AGAGCTACAC
AAACACCTGC AATATTTACC GCCTCAATTG TTAGAGCTTG AAAAGGAACG CTGTCTATCT
GTGCTTGTAC AATGGTTGAC GCTTGAAAGT TATCGCGCTC CTTTTATTGT TGCCGCCACC
GAAAATGCTT ACGCCATTGA ACTAAAGCCA ATTAGCTTTA ATGTGCGGGT AGACCGAGTC
GATAGCCCTA CTTCTGCTTC TGGCGAGCCC ACCGGCAACA GCATTCTCAT TGATTACAAA
ACAGGCTCTA CCCCCTTAAG CCTTTTACAG CGCGCGCCGC TAGTAGAGCC TCAGTTGCCC
GTATATACAC AACTTAAAGA GCTTAGCGCT AGCGCTGTTG CACTGGGGCA GTTACAACCC
AACAACTGCA CATTTGTGGG TATTGGTGAA GACGCTATTC AAATAGACGG CGTGGATGCA
CCAAGTAAAT TAAATAAATA TGACCTGCCA GATACCTGGG AGAAAGTGCT AGATTGGTGG
CAACAAGAAT TAATGAAAAG CGTAAAAGGT TTTAGCGAAG GCAATGCATT GAACATTACT
ACGGTAAAAA CCTATGAAAG TAGATTCGAG CATTTACAGC CAATTGTGCG TAAAACAGAA
CAGGAAAAAA TGGCAGATAT AAGCAAAAAA GCGGAGGTTT CACTATGA
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| Protein sequence | MIQTLQDWLT NLANKQDVHA DELLVTANQR LSRHILRLRQ LQLGVPVLPN QNIASYEQWR
SNLWSHCEDR GWVESTVINK QQEQFIWQQL LSQSNQTETL LADNKSLAKA LTDARIIVDT
WGIPHDQIEN ANHRESSFFL EVRTSLSSLY QDKGWITPEQ QSNKLIDLFN TGTLKKYSDI
GLYGFTELNP LQQALVTSAT NNVQQLPIEK CDQASAGLIE CVDWETEIET IARWAHQTLR
QNPSTQIGIV IPNLQKHRSQ IECAFIRQFD NDYLLNPTSS GADKPYELSI GSPLAEEPCI
ADALLLTQLL HKKLTKEEAL DLIRSEFWGQ NTEARLLALQ GLNDWPMTSV DTIRLTELLS
KAEKRIETAN DLNKEQFKDG FIEATDEMTT SNRILEAIQL YRLAAHKLDF QHWNGFLKRF
LKTLNWPGNR TLNSREYQAV EQFKLILDEL LVDQRCFIGS NLVTFPAYVA HLRQRLSEKV
FQQQTPRKPI QISGTLEAIG LSFDKCWVAN TTRSQFPESP QPNAFLPLAL QKAFATPRSS
PQKELDYAEQ LLTIFSECAN EVTFSYSKTA EDEHQQVSPL LPPMASKKLD EEQLAKNLYF
DKYNTASAYR NFSVFSDLCG LPLKHSEASI KIRRGVNALS TYAVNPLYAY LVHRLGAKQP
NPVYVGISPP QRGNILHNVL ETFWEATKNS AALKTKLENQ AAFLAELEAL ISDNVNAELH
KHLQYLPPQL LELEKERCLS VLVQWLTLES YRAPFIVAAT ENAYAIELKP ISFNVRVDRV
DSPTSASGEP TGNSILIDYK TGSTPLSLLQ RAPLVEPQLP VYTQLKELSA SAVALGQLQP
NNCTFVGIGE DAIQIDGVDA PSKLNKYDLP DTWEKVLDWW QQELMKSVKG FSEGNALNIT
TVKTYESRFE HLQPIVRKTE QEKMADISKK AEVSL
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