Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1987 |
Symbol | |
ID | 3967230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2496938 |
End bp | 2497648 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637921075 |
Product | regulatory subunit of cAMP-dependent protein kinases-like |
Protein accession | YP_527459 |
Protein GI | 90021632 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGTG CAAACTCGTT AAGTAGATCA ACCCACTTAA AGTTAGTCTC ATCCAGTGAA GAACATTCCC GCTCCCCCTG CTCTCAAGAT CTTATTTCTG ATTTACCACA CACTCGTTTA CGAGAATGCC CTGAGGGCGC TGTATTGTTC CAACAGGGAG ATGCCGCAAC CACCTTATAT CGGTTAAGTA GCGGTTTGGT AAAACTTGTA ACATATAAGC CTGATGGAAG TACCAGAATC GTCCGTGTTT GTTCTGCAGG TAATTTGATA GGCATGGAGG GCTTGTTTAA CGCGAAGTAT CATTACACTG CAATTGCGTT AAGCTCCGTA AGCGCTGTTG AGTGCCCTAT TTCTGATATT CAGCAACGAG AAAAACACGA TATTCAATTG TATCTTCAGT TAACGGAAGA GCTTTACGAC CAATTGACGC TCGCCGATAA GTGGATATCG GATTTTTCTT CAGGCAGTCT TAAACAAAGA ATTGTAAAAT TGTTAGAGTA CTTAACCAGT ATTAAACAGA GTCAATCTAG CCGTTTAATT GAGCTGTTAA AAGTGCAGGA TATTGCCGAC ATAGTAGCTG CCACCCCCGA GAGCGTTAGC CGAATATTGG CTGATTTTAA ACGTAAAGAA ATACTTGTAA AAAGCAGTGG TGCTTTAATG GATGTATATA CAATTGATTT GCAGAAACTG AACACGCCAA TGGTTATGTA G
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Protein sequence | MNSANSLSRS THLKLVSSSE EHSRSPCSQD LISDLPHTRL RECPEGAVLF QQGDAATTLY RLSSGLVKLV TYKPDGSTRI VRVCSAGNLI GMEGLFNAKY HYTAIALSSV SAVECPISDI QQREKHDIQL YLQLTEELYD QLTLADKWIS DFSSGSLKQR IVKLLEYLTS IKQSQSSRLI ELLKVQDIAD IVAATPESVS RILADFKRKE ILVKSSGALM DVYTIDLQKL NTPMVM
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