| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1772 |
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| Symbol | |
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| ID | 3966678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2262411 |
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| End bp | 2263454 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920855 |
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| Product | putative glycosyltransferase transmembrane protein |
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| Protein accession | YP_527244 |
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| Protein GI | 90021417 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.437602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTAC CCAGTATTAG TATCGTTGTT CCTGTTTATA ACGAGCAGGA AAACATCGCC
CCACTTTTTG AAGCCATTTC TGAAAGCATG GCCAACTATG ATGGCGACTG GGATGTAGTC
ATTGTTAATG ATGGCAGCCG CGACCAAACC GCCGCCGAGC TAAACCGCTG CGTTAAGCAA
TATGGCGACA AATTCCTCCA CGTTGAGCTG CAGCGTAACT TTGGTCAAAC CGCTGCCATG
CAGGCCGGTA TTGACGAAGC TTGTGGCGAC CTTATTGCCA CTATGGATGG GGACCTCCAA
AACGACCCAG CCGATATACC GCGCATAGTA AAAGAGCTTA TTGAGCGCGA TTTAGACCTA
TTGCAGGGCT GGCGCAAAAA CCGCCAAGAC CACATGGTAT CGCGCAAACT ACCTTCGCGC
TTGGCAAACA AACTTATTCA ACGCGTTTCT GGCGTTATGC TTGACGATTA CGGTTGCAGC
CTAAAGGTTT ACCGCGCAGA TGTGCTAAAG CAAATTCGCT TATACGGCGA AATGCACCGT
TTTATTCCTG TATGGATGGC AACCGTATGT CCACCACACA GAATTGGCCA AACTGTTGTA
AACCATAGAG CGCGTATGGC CGGTGAATCC AAATACGGTA TTTCGCGTAC TTTCCGCGTT
ATTATCGATT TAGTATCGGT ATTCTTCTTC TTAAAGTTCC GCGCGCGCCC CGGCCACTTT
TTTGGCTCAA TTGGTTTATG GGTAGGTGGT ATTGGCGGTT TGATGCTTAC TTACCTAGGT
TTGCTTAAGT TTGTATTCGG CCAAGATATT GGCAATAGAC CTATGTTACT CATTGCCAGC
TTACTCATTA TTGCGTCGTT ACAGTTTTTA ACGACTGGTG TGCTTTCAGA AATTCTAAGC
CGAATATTCT TCCAAACCAC TAACGTTAAA TCTTACACAG TACGCAAGCC GCTAACGTGC
GAATACTCAG CACAAATTCA AGAGCAAAAA GCAGCTGAGA AAATAGCTAA ACAAGAAGAC
GCGACCAAAC AGGAAAACGT GTAA
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| Protein sequence | MSLPSISIVV PVYNEQENIA PLFEAISESM ANYDGDWDVV IVNDGSRDQT AAELNRCVKQ
YGDKFLHVEL QRNFGQTAAM QAGIDEACGD LIATMDGDLQ NDPADIPRIV KELIERDLDL
LQGWRKNRQD HMVSRKLPSR LANKLIQRVS GVMLDDYGCS LKVYRADVLK QIRLYGEMHR
FIPVWMATVC PPHRIGQTVV NHRARMAGES KYGISRTFRV IIDLVSVFFF LKFRARPGHF
FGSIGLWVGG IGGLMLTYLG LLKFVFGQDI GNRPMLLIAS LLIIASLQFL TTGVLSEILS
RIFFQTTNVK SYTVRKPLTC EYSAQIQEQK AAEKIAKQED ATKQENV
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