21 homologs were found in PanDaTox collection
for query gene Sde_1305 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_1305  ribonuclease D  100 
 
 
80 aa  160  5.0000000000000005e-39  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00021107  normal  0.0271144 
 
 
-
 
NC_007963  Csal_0692  sodium pump decarboxylase, gamma subunit  48.72 
 
 
80 aa  61.6  0.000000003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3624  sodium pump decarboxylase, gamma subunit  37.5 
 
 
83 aa  52.8  0.000002  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0000194054  decreased coverage  0.0000000418029 
 
 
-
 
NC_011205  SeD_A3713  oxaloacetate decarboxylase subunit gamma  42.11 
 
 
80 aa  50.8  0.000006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0061  oxaloacetate decarboxylase subunit gamma  39.51 
 
 
79 aa  50.8  0.000007  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.979623  normal  0.547366 
 
 
-
 
NC_011094  SeSA_A0062  oxaloacetate decarboxylase subunit gamma  39.51 
 
 
79 aa  50.8  0.000007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0061  oxaloacetate decarboxylase subunit gamma  39.51 
 
 
79 aa  50.8  0.000007  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.493404 
 
 
-
 
NC_008740  Maqu_0970  sodium pump decarboxylases, gamma subunit  40.51 
 
 
83 aa  50.4  0.000008  Marinobacter aquaeolei VT8  Bacteria  normal  0.134882  n/a   
 
 
-
 
NC_011094  SeSA_A3545  oxaloacetate decarboxylase subunit gamma  43.42 
 
 
80 aa  49.7  0.00001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002524  oxaloacetate decarboxylase gamma chain  35.71 
 
 
85 aa  47.8  0.00005  Vibrio sp. Ex25  Bacteria  normal  0.0628389  n/a   
 
 
-
 
NC_011149  SeAg_B3544  oxaloacetate decarboxylase subunit gamma  40.79 
 
 
80 aa  47.4  0.00006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2894  sodium pump decarboxylase, gamma subunit  38.55 
 
 
98 aa  47.4  0.00007  Pseudomonas mendocina ymp  Bacteria  normal  0.11111  normal  0.988078 
 
 
-
 
NC_009831  Ssed_1320  sodium pump decarboxylase, gamma subunit  37.33 
 
 
98 aa  45.1  0.0003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.219843  hitchhiker  0.0088654 
 
 
-
 
NC_009783  VIBHAR_03492  oxaloacetate decarboxylase subunit gamma  34.52 
 
 
92 aa  44.7  0.0005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011083  SeHA_C0060  oxaloacetate decarboxylase subunit gamma  41.67 
 
 
79 aa  43.5  0.0009  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.130142  normal 
 
 
-
 
NC_011083  SeHA_C3651  oxaloacetate decarboxylase subunit gamma  43.86 
 
 
80 aa  43.5  0.001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0321  putative oxaloacetate decarboxylase, gamma subunit  36.67 
 
 
112 aa  42  0.003  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3616  oxaloacetate decarboxylase subunit gamma  35.62 
 
 
80 aa  41.6  0.004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.384488  normal 
 
 
-
 
NC_011149  SeAg_B0063  oxaloacetate decarboxylase subunit gamma  34.21 
 
 
79 aa  41.2  0.005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0638  oxaloacetate decarboxylase subunit gamma  33.77 
 
 
83 aa  40.8  0.007  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.471241  n/a   
 
 
-
 
NC_008576  Mmc1_3195  sodium pump decarboxylases, gamma subunit  40 
 
 
81 aa  40.4  0.009  Magnetococcus sp. MC-1  Bacteria  normal  0.139992  normal 
 
 
-
 
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