| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1261 |
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| Symbol | |
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| ID | 3965243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1613613 |
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| End bp | 1614386 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637920335 |
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| Product | VCBS |
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| Protein accession | YP_526735 |
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| Protein GI | 90020908 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000118793 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATAAATC TACAGCCATT ATCCTACTCC CAGCACAAGG ATATTAAAAT AATCACCCGT
CACGGTTCCG AGTTTGGCGA AGCGGTACAT ACTGCACCGG TACAACTCAA TGAGCTAGAA
AATATGTGCG CGCAAACACC CGTATGTTTT ATGAAAAGCA CAGAGACAGG GCAATTTGGC
CTGTACGCCA TACTGGGCTT TAACGAAGGA GAGAATCTAT TTTTAAATAA CGACCAATGG
CGCTTAGACT ATATTCCGCT GCAATTTAGG TGTCAGCCGT TTGCGCTTGG GCCAGAGCAA
CAACCCCATG CAACTAGCAC GCAATGTATA AGTATTAATA TTCATAGTAA AAGAATAAGC
ATCACCGAAG GCGAAGCACT ATTTAACGAA GACGGCACAC CTACAAGCTA CCTTAGCGGC
ATTAAAAATA GCTTGGCCGA TATAGCAAAG GGAGCGCACC CAACGCGATT ATTTATAGAT
ACACTCGTAG ACAGTGGCTT AGTGGAGGCA GCTACACTTG CGGTTACATT TAATAACGGC
GATATGTTTA ACTACAACGG CCTGTACACC ATCAACATAG ATAAACTTGA AGAATTAACA
CACGCGGCTC GCTCAGAGTC TCAATCTCAG TCTCGTGCCA ACCTTAACCA TGTGTTTTTA
AAGCAATTGG AGCAGCAACA CTTTCTTGCC CCCATTACTT GGCTCACACA ATCGCTTGGC
AATTTTAAAA AGTTAATTAC CTTGAAAAAC ACCAAGCTAA AAAAAGTAGA ATAA
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| Protein sequence | MINLQPLSYS QHKDIKIITR HGSEFGEAVH TAPVQLNELE NMCAQTPVCF MKSTETGQFG
LYAILGFNEG ENLFLNNDQW RLDYIPLQFR CQPFALGPEQ QPHATSTQCI SINIHSKRIS
ITEGEALFNE DGTPTSYLSG IKNSLADIAK GAHPTRLFID TLVDSGLVEA ATLAVTFNNG
DMFNYNGLYT INIDKLEELT HAARSESQSQ SRANLNHVFL KQLEQQHFLA PITWLTQSLG
NFKKLITLKN TKLKKVE
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