Gene Sde_0770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0770 
Symbol 
ID3966214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp994448 
End bp995050 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content49% 
IMG OID637919832 
Productputative phosphatase 
Protein accessionYP_526244 
Protein GI90020417 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.737749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0504873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTAG ATCAATATTC AGCCATTATT TTTGATATGG ATGGCACCTT GGTAGATAGC 
GGCCAGCTGC ACGAAGTGGC TTGGACGGAA ACGTTAAATC GCTTCGCTAT TCCTATCGAT
CGGCCTTTAA TGCGCTCCCT AGCGGGTGTG CCCACTAAAC AAACTATCGC CATGTTAATA
GAGCGATTCG ATTGTAAAGT GGACTCCCCC CTCGAAGAAA TGAACCACTT TAAAGAGCAA
GTGGTGCGCG ACAATATTCA CAAATACGTA AAGCCAACTC AATTGGCAGA GCTGGCCAAG
CGTTATCACG GCGTGCTGCC TATGAGTGTG GGCACCGGCG CTTATACCGA TGAAGCCGAA
GTTATACTCG AGCTGTGCGG TCTGCGTAAG CTGCTCGATT ATATAGTAGG TGCCGATCAG
GTGACTAAAC CTAAGCCCGC CCCCGATACC TTTTTGCGCT GTGCGCAACT TATGGGGCAA
CCAGCCCAGC AATGTGTGGT ATTCGAAGAT GCCAAGCTCG GCATTCAGGC GGCAATTGCT
GCGGGTATGG ATGCAATCGA TGTGCTCACC GCCTTCCAAA TAGAGAACGA ATACTTTCTG
TAA
 
Protein sequence
MVLDQYSAII FDMDGTLVDS GQLHEVAWTE TLNRFAIPID RPLMRSLAGV PTKQTIAMLI 
ERFDCKVDSP LEEMNHFKEQ VVRDNIHKYV KPTQLAELAK RYHGVLPMSV GTGAYTDEAE
VILELCGLRK LLDYIVGADQ VTKPKPAPDT FLRCAQLMGQ PAQQCVVFED AKLGIQAAIA
AGMDAIDVLT AFQIENEYFL