| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0721 |
|---|
| Symbol | |
|---|
| ID | 3965281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 932596 |
|---|
| End bp | 934518 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637919783 |
|---|
| Product | Outer membrane cobalamin receptor protein-like |
|---|
| Protein accession | YP_526195 |
|---|
| Protein GI | 90020368 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCTAC GTTTATATAT TGCCGCTGTG GTTGCATTGG CCGCATGCGA AGCAAATGCG
CAAACAAAAG CATCAGCGCA AACAAAAGCA ACCGAAGAAA TAGAAACCGT ACTGGTAACG
GGGGCGCGCA TAGAAGGTGC AAGTGCGGCT AGCGCCGAGG TAATAGATGC GCAAACACTC
ACTTTGCAAA ACAGTGCTAC AGCGTTGGAA TTGCTGCGCA ATCGCGTGGG TATAGATGTA
GTGCAACCCG GTGGCCCGGG GGGCATAACC GAATTATTTA TTCGCGGTGC CGAATCGAAT
TTTACTGTGG TGACGGTGGA TGGCGTGCGC ATGAATGACA CAACCAATTC ACGCGGTGGT
GGTTTTGATT TATCTACCCT TAACCCCGAT GAAATTGAAC GCGTTGAAAT TTTGCGCGGG
CCGCTCTCGT CTATTTATGG CTCCGATGCT TTGGCCGGTG CTATTAACAT TAAAACCAAA
AGCCCGCGCA ATGCCGCGCC GTTTAGCGCT CGTGTAGAAG GCGGCAACCA TGGTTATGCT
CGCGTGTATG GCGGTGTTGC ATTTGGCGGC GGCAATAATA CTGCCGCAAG TGGCCCGGCG
GTGAATCTAA GCGTGGCGCA TTTAGATGCT GGTGAGCCTG TACCTGGGTC CAGTGCGACT
ACCGAATCTT ACGCTGCGGC GGTAGATTGG GTGGATAACA GCGAGCGCGC CGTGGATACG
ACTATTCGCA AGGTGAGCCG CGAGCGCACC GGTTATCCAA GTGCCAGTGG TGGTTACGAA
TTTGCCGCAA GTGACGAGTT AGAGCGTGCG CAAGCCGATG ATTTAAGTGT GGGGTTTAGT
TGGCGCGAGC AAGTAAGTAA CAACGCAAAA TTAAACTTAA ATTTTACCCA CTATAAGCGC
GACGAATATG TAAATACACC TGCAGTAGAT GGCGGTGTGC TGGGTTCGCC TATACCCGCG
GCGGTAAGTG ATTCTGCACT TGCGCGCACA AAAGTTGTGG GGTACTCCAG CTTTACATTG
TCGCCAACAC TGCAAATGGT TGCCGGTGTA AGTGCAGAGA AAGAAAAGGG CGAAAACAAC
ACCGTATACG ATTACGGCTT TCCGCTGCCA GCCGAATTTG ATTTACAGCG CGATACGCAA
TCTGTTTTTG CCGAATTGAA TTACAGTAAA CCGCAGGCAA TAGATGTATT TATAAGTACG
CGTTTTGATT CTGCCGAGCA ACTAGATAAG CAAACCGATG AACTCTCTTC GAAGTTAGCC
TTTAGCTACC CGCTGTTTGC TAATGGTCGC GTGGGTGTTA GCTGGGGGCA GGCCTTTAAA
TTACCTAGTT TCTACGCAGT AGGTGATAGC CTAGTCGGCA ACCCCGAATT AAAACCCGAA
ACAAGCACTA CCAGCGAAGC GTTTATCGAG CATTTTTATA GCAACGGTAA GTTGCGGGTA
AGTGGCGCGG TGTTTAAATC GGAGTACAAA AACTTAATCG ATTTTGATTT TGCTACTTTT
AAGATGGTTA ACCTCGATGA AGTGGACATT TCTGGGGTTG AGGTGGAAAC GCTTGCGCGT
TTATCGCCAA ATTTTGAGGT GGGTGGCCAC ATAACCTACA CTTCATTTGA TGTGCAAAGT
GGCGAGCCAT TAGATGGGCG ACCCAATTGG CGCGGTGGCG TATTTGGTGA GTGGCGCAGT
AGCAATTGGT CGGCGAGGCT GCACTGGGCA TACACCGGTG AGCGGCCAAG TACATCTACG
GCTACAGGCC AAGTAGAGCT GGCTGGCTTT AACCGTATGG ATTTTGCCGT GGCGAGAGTT
TTATCTAAGC GGGTAACACT CTCTATGAAT ATCGACAACG TATTCGATTC CGCTTATCAG
GATGAGGTGG GGTTTCCATC CCCTGGTTTA GGTGGGCGTT TAGGTGTTTC TTACTCGCAC
TAA
|
|---|
| Protein sequence | MSLRLYIAAV VALAACEANA QTKASAQTKA TEEIETVLVT GARIEGASAA SAEVIDAQTL
TLQNSATALE LLRNRVGIDV VQPGGPGGIT ELFIRGAESN FTVVTVDGVR MNDTTNSRGG
GFDLSTLNPD EIERVEILRG PLSSIYGSDA LAGAINIKTK SPRNAAPFSA RVEGGNHGYA
RVYGGVAFGG GNNTAASGPA VNLSVAHLDA GEPVPGSSAT TESYAAAVDW VDNSERAVDT
TIRKVSRERT GYPSASGGYE FAASDELERA QADDLSVGFS WREQVSNNAK LNLNFTHYKR
DEYVNTPAVD GGVLGSPIPA AVSDSALART KVVGYSSFTL SPTLQMVAGV SAEKEKGENN
TVYDYGFPLP AEFDLQRDTQ SVFAELNYSK PQAIDVFIST RFDSAEQLDK QTDELSSKLA
FSYPLFANGR VGVSWGQAFK LPSFYAVGDS LVGNPELKPE TSTTSEAFIE HFYSNGKLRV
SGAVFKSEYK NLIDFDFATF KMVNLDEVDI SGVEVETLAR LSPNFEVGGH ITYTSFDVQS
GEPLDGRPNW RGGVFGEWRS SNWSARLHWA YTGERPSTST ATGQVELAGF NRMDFAVARV
LSKRVTLSMN IDNVFDSAYQ DEVGFPSPGL GGRLGVSYSH
|
|---|
| |