| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0715 |
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| Symbol | |
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| ID | 3965274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 924353 |
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| End bp | 925216 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919776 |
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| Product | nucleotide-binding protein |
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| Protein accession | YP_526189 |
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| Protein GI | 90020362 |
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| COG category | [K] Transcription |
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| COG ID | [COG4271] Predicted nucleotide-binding protein containing TIR -like domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.896502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAGC AACCTTTTTC ACAGAAAAAG CCAAATCTGC TAGTGCCACG TGATAATGCA
GCCAAAGCCC TTCAGGAAAG AATAGATAAA GGTCGTGCTC TTCAGGAAAC CAATTTCCAG
TCTATAGAGC AGCTTAGCGA TGTTCGTGCC GAACAGGATA AGTGGAATGA CTACAATATA
GAATATTTAT CACGGTGTTT TGATGTCCCA ACAATTTCTG AGGAGCATTC AAACGTGTCG
GGCTGGGCAG CGCTGGTAAT GAATCCAAGT CCACTGCAAC GAATTAAAAT GTTCAAAGAT
GGCATTGGCA AGCAGATTAC AAGTTTGGAA TCAATTTTAG AAAGGCTCGA GCTAATACCT
GAGCCGAGTT CAACAGCCTC TTTCTCTCAA AAAGCCACTA AAACTTCTAG TGGTGATCTA
AGCTCAGTGT TTATCGTTCA TGGTCACGAT GATGCTGCAA AAGTTACTGT TGCACGGTTT
GTGGAGAAGC TTGGATTAAA AGCCATAATT CTTCATGAGC AACCCGACAA AGGGCAGACA
ATAATTGAAA AATTCGAAAG CAATGCCTCT AACGTAGGTT TTGCAATTGT TTTACTAACA
CCTGATGATA TAGCTTCATC TAAAGCAACC CCCGAAGACA CTATGCCTCG AGCAAGGCAA
AATGTTGTCT TAGAGCTTGG GTACTTTTGT GGATCGCTTG GCAGAGATAA AGTGTGCGTT
CTATATAAAG ATGAAGTAGA AATACCTAGC GACTATTTGG GCGTCATTTA TATGCCTTTT
GGCAGTGGTG ATAGTTGGCA CTTCAAACTA GCAAGGGAAA TGAAATCAGC TGGGCTGGAC
ATCGATCTTA ATAGTGCATT GTAG
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| Protein sequence | MKEQPFSQKK PNLLVPRDNA AKALQERIDK GRALQETNFQ SIEQLSDVRA EQDKWNDYNI
EYLSRCFDVP TISEEHSNVS GWAALVMNPS PLQRIKMFKD GIGKQITSLE SILERLELIP
EPSSTASFSQ KATKTSSGDL SSVFIVHGHD DAAKVTVARF VEKLGLKAII LHEQPDKGQT
IIEKFESNAS NVGFAIVLLT PDDIASSKAT PEDTMPRARQ NVVLELGYFC GSLGRDKVCV
LYKDEVEIPS DYLGVIYMPF GSGDSWHFKL AREMKSAGLD IDLNSAL
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