Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0641 |
Symbol | |
ID | 3964970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 810673 |
End bp | 811470 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637919702 |
Product | hypothetical protein |
Protein accession | YP_526115 |
Protein GI | 90020288 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAAAC TCACAGATGT TGGTCAGACC CTTGTTAATA ATATTAGCTC TCGCTATGGG CTAAGTAATG ATGCCGTTAT TCATATGTTG GTTGCGGTAA ATAATGGCGG CGGTTCGATG GCGCAATTTT GCTGCCCTGA GCTGGGCGGT TCGGGCCAGT GGATGCGCGG CGGAATGACA ATGGTTGGCG ATATGTTTAA CCACGGTTTA AAGGCTACAG TCGATAACCT GTGTAACGAG CTTGCTAATG TATTGGCCAA TAATCAGGTT TTTCCGGTGG TGCCAGCGGG CACCCCTGGC AGCAATCAGT GGTGGCCAGC GCATTTAGGC AGCCCTTTTA GCAGTGGTGG GCAAAATAAT ATTCGCTATG CGGTGTTTCC TAATCGCTTG GCGGTAGAGC TATATGGGCA GGTATCTGTT TACGATACGC TTAATCATAA TATTGGCGGG GTGAGCCAGC AGCAAGGCGG GGATACTTCG CTAACGTTTA GTAGCCAGTT CGGTACTATT TCAGTGTCTA GCCTACCATT GCTGTCGGGG CCGGGAATTG CGCCTGCACC GCAAACCAAT TTTGCTCAAG CTAGCTCAAG TAATAGCAAT AGCTATACGG CTAACAATGT AAACACCGAT GTAAGCGTAG ATATGGCTGG TGGGCAAATA GATGCGAGTA ATCAGCCCGC AATGGATGTA AATACAGCGT TAGATTACAT AGGTAAGCTA GCGCAATTGC GCGATAGTGG TGCGCTTACC GATGAGGAAT TTAATGCGAA AAAAACCGAG CTTTTGCAGC GAGTTTAA
|
Protein sequence | MQKLTDVGQT LVNNISSRYG LSNDAVIHML VAVNNGGGSM AQFCCPELGG SGQWMRGGMT MVGDMFNHGL KATVDNLCNE LANVLANNQV FPVVPAGTPG SNQWWPAHLG SPFSSGGQNN IRYAVFPNRL AVELYGQVSV YDTLNHNIGG VSQQQGGDTS LTFSSQFGTI SVSSLPLLSG PGIAPAPQTN FAQASSSNSN SYTANNVNTD VSVDMAGGQI DASNQPAMDV NTALDYIGKL AQLRDSGALT DEEFNAKKTE LLQRV
|
| |