Gene Sde_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0623 
Symbol 
ID3964952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp788217 
End bp789023 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content42% 
IMG OID637919684 
Producthypothetical protein 
Protein accessionYP_526097 
Protein GI90020270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTG GAGGTTGTAT GCGTTTTATT TTTTTAGCAG TGTTTTTATG TGTGGCGAGT 
AATGGCTATG CATTAACTAT GGGGCAGGCA ATAGATAAAG CCGGGCAGCA GCGTATGTTG
TCTCAACGCA TTGCGCAGTC GTTTATTCTA ACAGGCATTC AACCAGATAA CGCGCGTTAC
AAAGCGCAAT TAGATAAAGC CATTAAGCAG TTTCAAGAAA ATTTAGATAC TCTGCAAGCC
AATAACGATG CGATAAGCAT TCGAGGTGAG TTACTTACTG TTCGCAATTT ATGGAAGCCG
TTTAAAGCTG TAGCAACCGG CCCAGTTACT AAACAAAATG CAGCGGAGCT TTTGGAAAAA
AGTGATGCGT TATTAACTGC CGCCCATGCC TATGTGCAAA AATTAGAGAC GTTATCTAAT
CATAAAGGCG CCGAGCTGGT GAATGTTTCT GGGCGTCAGA GAATGTTGTC GCAGCGCATA
GCAAAACATT ACTTGGCGTA TTATTGGGGG TTGGAATCCG AAGCAAGTTT AGAAAAACTC
TACGCCGACC TAGCTGAGTA CGAGCTGATG TTAACTTTTT TGAAGGATAG TCAGTTCAAT
ACCGAAACGA TCAAAAAGAA AATACTCAAA ACCGAGGGGC ACTTAAAATA CGCCTCCAAA
GGGTTTGATG GTGATATGTC GCTAAAGGGT GACCGTTTGA TTTTTGTGAT AACCGGTACT
ACAGATACAA TGTTGCACAA TATGAATGAA ATTACGCATC TATATGCAAG CGAGCTGGAG
AATACCGAGC AAGTTGCTGC GTTCTAA
 
Protein sequence
MSVGGCMRFI FLAVFLCVAS NGYALTMGQA IDKAGQQRML SQRIAQSFIL TGIQPDNARY 
KAQLDKAIKQ FQENLDTLQA NNDAISIRGE LLTVRNLWKP FKAVATGPVT KQNAAELLEK
SDALLTAAHA YVQKLETLSN HKGAELVNVS GRQRMLSQRI AKHYLAYYWG LESEASLEKL
YADLAEYELM LTFLKDSQFN TETIKKKILK TEGHLKYASK GFDGDMSLKG DRLIFVITGT
TDTMLHNMNE ITHLYASELE NTEQVAAF