| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0588 |
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| Symbol | |
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| ID | 3964995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 729351 |
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| End bp | 730859 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919651 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_526064 |
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| Protein GI | 90020237 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.917971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00918466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGAAA CTAAAAAGCG TGTCGTTATT CTTGGCGGTG GTACCGCAGG TTGGATTGCC
GCAAATCTAA TGGCGAAACA CTGGGAGCAA GAGGCATTCG AAATAACATT AGTCGAATCG
CCAAATATTG GAATAATTGG AGTTGGTGAA GGTTCAACTC CTCCGCTTAA GGTGTTTCTC
GATTTAATCG GTTGCAAAGA AGAAGAGTGG ATGCCCGCTT GTAACGCAAC CTATAAAGTT
GGCATTCGTT TTAATGATTG GTCTATTAAG CCTGGGTATG AAAGTTACTT TCATCCATTT
TATTCAAAGA CGGATGATCA TACTATTCCA GCTTTCTTTC ATAACAGTTT TCTAATTCGT
CAGGGCGTTG ACTTAGATGG CTTGCCCGAT CATTTCTTTT TGGGGGTCGA GCTTGCAAAG
CAAAAAAAAG CCCCACTACC AGCGGAAAAT TTCCCCTTTG AAACCAGCTA TGGTTATCAC
TTTGATTCAA ATTTACTCGG CCAATATTTA GCTAAAGTAG CTGCGTCGAG AGGAGTTAAG
TACAAAAAGG CAACAGTATG CGAGGTTGTA CTAAAAGAGA ATGGTGATGT GAGTCATTTG
TTGACTGATG AAGGGGAATC TATAGGTGGA GATTTATTCG TTGATTCAAG TGGCTTTAAA
GGGCAAATAA TACAGCAAGC GCTTAAAGTT CCGTTTATAA GTTGTGTGCA AAGTTTGTTT
AACGATTCTG CGGTGGTTTT GCCAACCGAT CAAGTTGATG AACCCAATTG TCAAACTACA
TCTACAGCCA TGAAAAATGG TTGGCGTTGG GATATTCCGT TAACAAATCG TACCGGTAAC
GGATATGTGT ATAGCTCCAG TTTTTGTGAC GCAGACGCAG CCGAAACTGA GTTGCGCACT
ACCTTGAACT TGCTCGATTC AGATGTGGAG GCTCGGCACC TAAAATTTAA AGTTGGTCGA
GTACAAGAGC ATTGGGTGAG AAACTGCTTG GCAGTCGGGC TATCTCAGGG GTTTATCGAA
CCGCTAGAGG CTACCGCGCT TGATATGGTG CAAGAAACTG TTGTGCGATT TATAGAAGCC
TATGATAAAG GCCAACATAC AGAGCAGAGT CGAAAAGATT TTAATAGTCG TATTAGCCAT
CGTTTTGATG CAGTGCGCGA CTATATTACG GCTCATTTTA GGATTGTGTC ACGTACAGAT
ACCGAGTATT GGAGAGCTTG TGGTTCGAAT GATAAAATAT CAGCTTCACT ATACTCAATA
CTAAGCTCTT GGATGCAGGG AAAAAATATC ACTCAGGAGT TGGAACAGCA GCAGCTCGAT
GCATATTTCC CAAATATTTC TTGGAATTGT CTGTTGGCAG GTAAGGGAAT TTACCCTGAT
AAAAGCCAGT TGCGTAAAGG TAATGAACTG GCACATAAGT ACAAGACGAC GGATATAAAT
AAATTTATTA AAGCTTGCGC GTTGAATTAT CCTACACAAG CAGACGTATT GAAGCGTTAC
ACCAGATAG
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| Protein sequence | MSETKKRVVI LGGGTAGWIA ANLMAKHWEQ EAFEITLVES PNIGIIGVGE GSTPPLKVFL
DLIGCKEEEW MPACNATYKV GIRFNDWSIK PGYESYFHPF YSKTDDHTIP AFFHNSFLIR
QGVDLDGLPD HFFLGVELAK QKKAPLPAEN FPFETSYGYH FDSNLLGQYL AKVAASRGVK
YKKATVCEVV LKENGDVSHL LTDEGESIGG DLFVDSSGFK GQIIQQALKV PFISCVQSLF
NDSAVVLPTD QVDEPNCQTT STAMKNGWRW DIPLTNRTGN GYVYSSSFCD ADAAETELRT
TLNLLDSDVE ARHLKFKVGR VQEHWVRNCL AVGLSQGFIE PLEATALDMV QETVVRFIEA
YDKGQHTEQS RKDFNSRISH RFDAVRDYIT AHFRIVSRTD TEYWRACGSN DKISASLYSI
LSSWMQGKNI TQELEQQQLD AYFPNISWNC LLAGKGIYPD KSQLRKGNEL AHKYKTTDIN
KFIKACALNY PTQADVLKRY TR
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