| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0178 |
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| Symbol | |
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| ID | 3967962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 218883 |
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| End bp | 221525 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919237 |
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| Product | hypothetical protein |
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| Protein accession | YP_525654 |
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| Protein GI | 90019827 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0441956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC TTTCACGTTT TTTAACATCC TTACCCCTGA TAATAACGAT CACATTGGGC
ATGAGTGGCT GCGACACTAA CGAAACGAAT AGCCAGTCGA ATGCTCGCCA CCTAATCTCC
GCTCAAAGCT ACCACAACCA ACACCAATAT CGCGCCGCCC TACTAGAAAC GCGCAACGCC
CTTAAAGTGT CGCCAAGTGA TGACGCTGCG GAACTCTACG CGCAAATTTT CTTAGATATA
GGGCAACCCA AAACGGCTGC AGAATTTATA GAAAGCTACG GTGCAAGAAG CTTTGAGCTT
TCTGCACTAC TCGTACGTGC CTATCTTGAT TTAGGCAAGT ATATTTCAGC TGAAAAAACA
CTGAAAAACT TCAATTCCGA AGAACTTCCT AACAACGAAG GAAAAGTTTT ACTGGCCGAA
GCCCTCGCCG GGCAAAACAA TTACAAACAA GCCAATGAGC TACTAAGTAC CGTATTAAGC
ACCGACCCAA CGCATTTAAA TGCGCTATTA CTTACCTTGC AAATTGCATC CATTCAGCAA
AACCCTGTTG CTGCACAGCA GGCGATTATC GAGCTTAAAA AGCATCACAG TGAATCCCCC
AAAGCGCTTG TAGTGCTAGC CAGAACCGCT ACAGCACGTA AAGACTATAA CGAAGCCGAA
CAATTACTTA TGCAATCGCT TCGCTTCGTA CCCGATTCAG ACATAATGAC ACCCGCCCGT
GCTTCTACCT TATTGCTGCT TATTGAAACC CTAACCAATC AAGGTCGGTA CGCGGACGCT
GCCCCCTACA GCAACGCGCT AGCCAATGCG AACCCCAACT GGCAAGAAAC CCAAGACAGA
ATGGCAAATG CTATTGCCAA CCTGCAATCG GGCGACTTAG AGGCCGCAGA AAAAATTCTA
ATGCAGATAC AGCAGGATAA CCCCAACCAA GGCAGATCAG CCGCGTTACT TGGCATAATA
AACCTGCAAA AAGGTGACTC TGAAAAAGCT AGTGAATACT TTGCTGACAA TATCGACCCC
GAAACGGCTG CCCCGATATT TACAGGTGCG GCGGCACTTG CTCAGCTTCA GCAAAACCAA
ATTGACTCAG CCCTGCAAAT GCTTGAAACA GCTTTAGAGG CCAACCCAGA CAACAAACGC
TTACTTGTAC TGTATGGCTT AGCTGCCACA CGCACCCAAG ACCTGTACCA AAAAGGGATA
GAAGCACTGC AACAGGCCGC GAGCCAAGGT GAGCCAGATT ATAGAATGCA CACCACTTTA
GCTGACGGTT ACTTTAATGG TAAAGAAATA GCCAAAGCCA CAGCCGAGCT CGAAAAGGCA
CAAGCTATTG CGCCAGATAA CATTGCATTG CGCTACCACA TCGCCAAGCG CTACTTAGCT
AATGGCCTAA TAGATAACGC CAAAGCATTC GCTCAAGCGC AATTAAAGAA AGATGAAAAA
GATGCTCACA ACTGGATTAT TCAGGGGCTG GTGGCATCAA TAGATAAAAA TATTGATCTT
GCTAATGAAT CGTTTAAAAA AGCGCTAAGC ATTGATAGCA AATCGTACAC CGCCAATTTA
TATCAAGCAC TTATTGCAGC GAATCAACAG AACTGGAAGC TAGCAACGCA AGGGTTTACC
AATGCAATAG CAAGTAATCC AATACAGCTA GCCCCTTATG GTGGCCTACT TAAAAGCTTA
GCTGCCACAG AATCACCTAA CGATGTGGTT ACCCGCTTTG AGGCATTAAC TGGTAAAAAC
GGCGATAAAA CTAACGCTGC ATTAATTGCT ACCGATTACT TAATCCAGCA AAACAAAACA
GCTGAGGCGC AGAATAAATT CGAAACTATT AACCTTGCCG AGCTAAAAGA GCAGCGCTCG
CAGGCGAGTG CCGTAGCAGA AGAAATTTAT ATTAATTTAA TTAAGCTGCA TGTACGCGAT
GCCGCAAACG CCAACGATCA AAAAGCGGCT GTTGCTTATT TGGAACAGGC TCAAGCTCAG
TATCCAAACA ACACCAAGTT ACTAAGCCTA GCAGCGGCCT ACTACCTTCA ATACGACAAA
CTTGCCGAAG CCGCAGCCTT AGCAAGTAAA CTTCGCCAAC TGAACGAAAA TGTATATTCC
ACTTTGATTA GCGCAGATAT CTTAATCAAA CAAAACGATT ACGCCCAAGC AATAAGCTCA
CTGAAAAGTG AGTGGAAACG AGAGCCAAAC CAAGATATTG CACTGGCTAT TCAAAAAGCG
GCACTCGCTT CTAACACCGA CCTCGATGAA GACTTTTTAC AATCTTGGGA GGTCGCCTTC
CCGAATCAGG TTCAGCCGCA TTTTTATCGT GCCAATAAAG CGCAACAAAG TGGTGATATT
GTATTAGCAC TGAAACACTA CGAAAAAATT ATTGAAATAA ACCCCAGTAA TGTGGGCGCT
CTAAACAATG CCGCGTGGTT TTACTTCGAA AGCGATAAAC TAAAGCGTGC AGATGAACTG
GCCACCAAAG CCGTTGCGCT GGCACCTAAC AGCGCGGCTG TACTCGATAC CGCAGGCTGG
ATTAAATACA ATTTAAACCA AGCCGAAGCA GTAGAGCTTC TTAAAAAAGC AGCCGAGCTG
GCGCCCGACA ACCAAGAAAT AACCACACAT TACAACACCG CCAAGCTGCA TTTTAATCAA
TAG
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| Protein sequence | MKQLSRFLTS LPLIITITLG MSGCDTNETN SQSNARHLIS AQSYHNQHQY RAALLETRNA
LKVSPSDDAA ELYAQIFLDI GQPKTAAEFI ESYGARSFEL SALLVRAYLD LGKYISAEKT
LKNFNSEELP NNEGKVLLAE ALAGQNNYKQ ANELLSTVLS TDPTHLNALL LTLQIASIQQ
NPVAAQQAII ELKKHHSESP KALVVLARTA TARKDYNEAE QLLMQSLRFV PDSDIMTPAR
ASTLLLLIET LTNQGRYADA APYSNALANA NPNWQETQDR MANAIANLQS GDLEAAEKIL
MQIQQDNPNQ GRSAALLGII NLQKGDSEKA SEYFADNIDP ETAAPIFTGA AALAQLQQNQ
IDSALQMLET ALEANPDNKR LLVLYGLAAT RTQDLYQKGI EALQQAASQG EPDYRMHTTL
ADGYFNGKEI AKATAELEKA QAIAPDNIAL RYHIAKRYLA NGLIDNAKAF AQAQLKKDEK
DAHNWIIQGL VASIDKNIDL ANESFKKALS IDSKSYTANL YQALIAANQQ NWKLATQGFT
NAIASNPIQL APYGGLLKSL AATESPNDVV TRFEALTGKN GDKTNAALIA TDYLIQQNKT
AEAQNKFETI NLAELKEQRS QASAVAEEIY INLIKLHVRD AANANDQKAA VAYLEQAQAQ
YPNNTKLLSL AAAYYLQYDK LAEAAALASK LRQLNENVYS TLISADILIK QNDYAQAISS
LKSEWKREPN QDIALAIQKA ALASNTDLDE DFLQSWEVAF PNQVQPHFYR ANKAQQSGDI
VLALKHYEKI IEINPSNVGA LNNAAWFYFE SDKLKRADEL ATKAVALAPN SAAVLDTAGW
IKYNLNQAEA VELLKKAAEL APDNQEITTH YNTAKLHFNQ
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