| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0172 |
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| Symbol | |
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| ID | 3964806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 211673 |
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| End bp | 213322 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919231 |
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| Product | enzyme involved in methoxymalonyl-ACP biosynthesis-like |
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| Protein accession | YP_525648 |
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| Protein GI | 90019821 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3882] Predicted enzyme involved in methoxymalonyl-ACP biosynthesis |
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| TIGRFAM ID | [TIGR01681] HAD-superfamily phosphatase, subfamily IIIC
[TIGR01686] FkbH-like domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTC TACAGGCAAA AAAAATACTC AGGGAAAGTA AAGCGAGTAA CTCACTTGCC
TGTGAAGTAT TAACATCGGC ACAGGTAGAA AACCTGTCTC CATTTTTAGA GGCCCACCTC
GCGTTAAAAA ATATTCGTGC GCAAGCGGCT TTTACGCCGT TCGGTACCTT AAGGCAGCGA
CTGCTTGTAG ATGAGAAAAA TGACACGGCA TTGATAGCGT GTTTGTACCC CTGGGATTAT
TGCCCAGCGC TAGATTGGCG CCAATATCAA ACCGGCACGT CGGTTACGCT GCCTGAGTTA
GTCGAGCAGG TTTTAGCCTT CGATCGGTTG TTGGGTGAAA AGGCACACGC GGGCGTGTTT
ATCGATGCTC CGGTACCGCC TGTGCTTAAT GCTAACGAAA CACAAGTGCT TAGCAATTTA
ATTGCATCCT GCGCAGTTAA GCGCGGCTTT AAATATTTAA GCGAGCAAAG TTTTAGTTTA
GCGGCCTACT TGGAGTTTGG TCGACCAATT TCAAACGCAA TGGCACCGTA TGTGGCCAGT
GTTTTGTCGG AAGCGCTATT TAAAAATAAC GTGATAGCAA CCCCTAAAAA AGTGATTCTT
ACCGATTTAG ATAACACTGC ATGGTTAGGC GTAGTGGGTG AGGATGGCGT AGCAGGGGTG
GCGTGCGCAG CATATGGCCC AGGTTTTGCT CACTATATTT ATCAATGTTT TTTAAAACGC
TGTGTAGGCA GTGGCGTATT GCTTGTTGCT GTTTCTAAAA ACGATATTGA TTTGGCCAAG
GCACCGTTTG AACAAAAAGA GCTGCCGCTT AAGCTTACAG ATTTTGTGGA TTTTAAAGTG
GGCTATGGTC ATAAATCACA ACTGATTCAG CAGGTGAGTG AAGAGTTAAA TTTACCGCTA
GACAGTTTTG TGTTTATTGA TGATAACCCC ATTGAATTGG CGGAGGTGGC GTCTGTGCTA
CCGGCAGTAA CAAGTGTGCA GTTTCCGGCT GAGGTTGATG AGTTGCCGGC TGTGATAGAA
ACGTTACAGC TATATGTCAA TTTAACACAA GGCTCTAAAG AAGATTCCGA ACGTACAGAG
CTTTATAAAA TACGCGCACT AGCCGAGCAA GAGCGCAAAC AAACGCCATC GCTGCACGAA
TATTTAGCTA GTTTAGAAAT GGAGCTGCAC ATAAATACGC AGGCGCATGT CGATAACGCG
AGAGCAATAC AATTAATTAA CAAAACCAAC CAATTTAATT TAAATGGATT GCGTATTACC
GAAGCAGAAC TGTCGAAAAT ACTTACAGGT GGTGGCAGTT TATTTACTGC AACGCTAGTA
GATAAGTTTG GTAATCACGG CGAAATACTT GCTTGTGTGG TAGATGCAGA AGGTAAACTG
TTGCGCTGGG TTATGTCGTG CCGAGTGCTG CAGAGAAACG TCGAATATTA CTTTCTTTAC
TGGCTTTTAA GTGAATCTGG TATTAGTCTA AAGGTTATAG AGTTTGTAAA AACAGATCGC
AATGCACCGC TCGAGCAATT TCTTATTACT ACTGGCCTTG TTCCGGCTGA TAGTGGGCAG
CAGGTTAACT CAACATTAGA TTGTGAAGGG ATTCGTAAGG CTTTATACAA AGCGACTAAA
GGAATATTTA AGGCCGTACG AGTTAATTAA
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| Protein sequence | MKFLQAKKIL RESKASNSLA CEVLTSAQVE NLSPFLEAHL ALKNIRAQAA FTPFGTLRQR
LLVDEKNDTA LIACLYPWDY CPALDWRQYQ TGTSVTLPEL VEQVLAFDRL LGEKAHAGVF
IDAPVPPVLN ANETQVLSNL IASCAVKRGF KYLSEQSFSL AAYLEFGRPI SNAMAPYVAS
VLSEALFKNN VIATPKKVIL TDLDNTAWLG VVGEDGVAGV ACAAYGPGFA HYIYQCFLKR
CVGSGVLLVA VSKNDIDLAK APFEQKELPL KLTDFVDFKV GYGHKSQLIQ QVSEELNLPL
DSFVFIDDNP IELAEVASVL PAVTSVQFPA EVDELPAVIE TLQLYVNLTQ GSKEDSERTE
LYKIRALAEQ ERKQTPSLHE YLASLEMELH INTQAHVDNA RAIQLINKTN QFNLNGLRIT
EAELSKILTG GGSLFTATLV DKFGNHGEIL ACVVDAEGKL LRWVMSCRVL QRNVEYYFLY
WLLSESGISL KVIEFVKTDR NAPLEQFLIT TGLVPADSGQ QVNSTLDCEG IRKALYKATK
GIFKAVRVN
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