Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3612 |
Symbol | |
ID | 4842308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4237980 |
End bp | 4238729 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640120880 |
Product | putative replication protein |
Protein accession | YP_001051956 |
Protein GI | 126175807 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000425732 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTATGG AATTGATGGT AAAAGCGATG AAGGCCAAGG TGGGTAATCC ACTGCGTAAG TTGGTGTTGA TTAAGCTGGC CGACAACGCG AACGATAATG GTGAGTGTTG GCCGAGCCAT CAGCATATTG CTGACCAGTG CGAGATTGGT CATAGCACAG TGAGAAAGCA TATTGCGGCC TTGGTTGATA TGGGTTTTGT GACGATTAAA AATCGTAAGG GACCTAAGGG AAATTTAACC AATATTTACA CGATTTCAAT CTGCTACGAG GTAGCACCCC CTGTGCTAGC AGATAGCACC GAAGGGGTGC CACCAGATAG CATAGGTATG CCACCAGATA GCACACCCCC TGTGCCACCA GATAGCACCG GAATCTATCA CTCTTTTGAA CCTATCAAAG AATCTTTAAA AGATAGTTGT CCAGCAACGA GTGCTAAGTC GGTTTTCAAT GCGTTTTTTA AAGCGTATCC CGCTCATCGC AAAGGCGGGG CGGATTCGGC TGCGTGGAAA GCGTGGAAGG CCGAAAAGCT GACCGACGCC GATTGTGTGT TGGCGGTGAG CTGGTTGAAG GAGGCTGCGG CGCTGGATGC GAGTTGGGGC TTTAGCGCTA ACGGCCAGTT TGTGTTGGGT ATTACCAAGT TTATCCGTGA ACGCCATTGG CTAACACCGT TGCCAAGACC GATAGCAACT GCCGTTGGGC AAGTGGATTG GCGCCATGCG GTGTACGACC CAGAGGATCC TTTGATATGA
|
Protein sequence | MSMELMVKAM KAKVGNPLRK LVLIKLADNA NDNGECWPSH QHIADQCEIG HSTVRKHIAA LVDMGFVTIK NRKGPKGNLT NIYTISICYE VAPPVLADST EGVPPDSIGM PPDSTPPVPP DSTGIYHSFE PIKESLKDSC PATSAKSVFN AFFKAYPAHR KGGADSAAWK AWKAEKLTDA DCVLAVSWLK EAAALDASWG FSANGQFVLG ITKFIRERHW LTPLPRPIAT AVGQVDWRHA VYDPEDPLI
|
| |