Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3592 |
Symbol | |
ID | 4844164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4218759 |
End bp | 4223039 |
Gene Length | 4281 bp |
Protein Length | 1426 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640120860 |
Product | TP901 family phage tail tape measure protein |
Protein accession | YP_001051936 |
Protein GI | 126175787 |
COG category | [S] Function unknown |
COG ID | [COG5283] Phage-related tail protein |
TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTTTA AAGATCAAGA AGTGAATTTA ATTATTCAAG GCAAAGATCT GTTTTCTGCT GAGGCCAAAA AGTCTGAGCA AGCGTTGCAG GAGTTGGGGC GCGAAAGCGA AAAGCTCAAT GAGCAACTTG ATGATTTAAA ACGCCAGCAA GAGGCGATTA AGGCGATCGA TTCGCTTACT GAGTCTATCA ATAAGGGCGA ACGCGCCTAT GTTGATAACG CCCAAGCGCT CGATAAGTTA AAGCAAGAGC AGAAGCAGGC TAATACAGAG GCAAAAAACC TTGAGAAATC GCAGCAAGAT GCGGCTGCCT CAACGGCTAA GCTTGAAACT GAATACAGCC AAACTGCGGC GCAGTTGGCT AGCTATGATA GCCAACTTGC CTCCGCTCGC GCCGAAGTTG AGCGTTTAAC CACGACTCAA AATAAAGGTG CACAAGCTAG CCAAGCACAA GCAAAGGCAT TATCCGCGGC TAAATCCGAT TTGCAGCAGC TTGAAGCGGC CCAAAAAAAT ACCGCCACCA GTGCGACCAA GTTGGCAAAC GAGCTTGAGC AAGAACGTAG CGAATTAACG CGCTTAGGTA CCGAAGTTGA AAAGGCTGGC CGTAATAAAG CCGAATATGC GCTCAAGGTT AAAAGCGCGC GGACTGAGTT AAATCAACTC GGCTCTAGTC TTGGTCGCAA TAAAGCGGAG TTAGACAAAC AACAAACCGT GCTCAATAAA GCCGGCATTG ATATGGGTAA GCTGGCCGAT GCCAGCCAAG AATTAAAAAC CAAACAAGCT GGCGCAGAAG CCGCGCTTAA AGGGGTTAAC GATAAATTAG CGCAGCACGA TAGGTTATTG GTTGAGTCTA AAAACTCGGC CAAGGTCGCC AACGCGCAAA CTGACCTCAC CACCAAGGCG GTGAGCACGC TGGCTAAGGC TTATGCGGTA TTGCTGTCGG CACAGCAGGC GGTGCAAACG GTAAAAAGTG GCGTTGAAAA CTACGGTGAG TTAGAAGCCG CTATTACTAA GGTTGAAAAA ACCACCAACC TTGCCCGTGA TACTGTGGTG AAAATGGCCG ATGAGCTTAA AAACCTCAGC GAAAACGTCA CCCCTACCAG CACGAATGAG CTGCTGCGCA TGGCGGAAGT GGCGGGCCAG TTAGGCACTA AATCGACTGA AGATATTCTC AGCTTGGTGG CTGCGGCTGA TGCGTTGGGG TTATCAACCA ACTTAGCCGG CGATGAAGCG GCAACCATGC TGGCCAGAAT TTTAGGGATG ACTCAAGAAG GTATCCCTGA GATCCATAAT TTATCCTCGG CTGTGGTAGC GCTTGGTAAC GACTTTGCGA TTACCGAAGC TGATATTGTG CAGATGACCA AGGAGATTGT TTCTGGTACC CGTGAAATTA ACTTGGGTTC TGCAGCCGCT GCGGCGTTTG GTACTACGCT GGCAGAGTTA GGCCAACCAG CAGAACGTTC ACGAACGGCT ATGCAACGCC TTGGCGCTGA GATTAACGAA GCGAGCAAAA AAGGCGGCGA TTCACTTGAG CGATTAACTA AGATTACCGG GTTAACTGCT AAGCAGATTG AGCAAGATCT CGGTGACGCG CCTGAAAAGG TATTGGTTAA ATTCCTTGAG GGCTTACAAA AGGTTAAGGC CGAAGGCGGA TTAGTCTCTG ATGCCCTTAA ATCGATGGGC ATTGATGGCA CTGAGGCGAC AGGCGTTCTC AGTGTATTAG CGGATGGTAC AGATCGTTTA AAAGTTGCAT TAGAGCTAAG TAATAAAGCC TATGCCGCTG GCGATTACCA CATGAAGGAA GCGATTAAAG CTTATGCTGA TCAAGAGTCG GCAATCGGTC GCTTACAAAA CAAATTCCAC GGTTTAACGA GTGAAATCGG CCAAGCGTTC TCAGATGAAA CTGATGCTGC TATTCGTGCC GCTGGCGCTG CTTTGGATGC AGTTGATCAG GAAGTGATAA AGCTTTTAGA ACACTTACCA GAAATTGGGA AAGGCTTTGT TGAATTATTG GGTGACGTCG ATAACTTTAT TGCAGGCACC AGTAATAGCT TTGAAACGCT AGACTTAACA ATGGGAATCT TTGCAAATGG TTTAAATGCT ATTGGCGTAA GCGTTAATAG TATGACCCTA GAGTTAAGCA AACTAGATAC TACCCAGAAA ACTATCTTGG CTATTGCCAG TAAAATAATG GGTATTGAAT ATGTCACTGC AAAACAGGTT GAAGATAGCA AGCTACGTAG CAAAGAGATT CAAGAATCAA TTACCCGTGA TTTAGATGAT ATTACTAATC AAACTAAGCG GATGAAAGGG GAGTCATCCA TTGCTTACGA GGGGTTAATT AAAACAGCTG TTAAATATCG TGGCTCAATT GACCAACTAT CAATCGCCCA GCGCAATCAG TTAAACGATA TCTTATTGTC GGGGAAATAT AATGGTGACC TTGAAAAAAC CTATCGTGAA TTAACGGCTA CATTAGTTCG TGCGAACCGC GAAACTGAAA TTGAGGCTGA ATTTAAAAAT AAAGCTGCAG ATGCAAGTAA GAAAAAAGCA GAAGAAGATA AGAAGGCTGC CGAAGCCGCC GATGCGCTTG CTGCTAGTCA GGGGGCTATA AATAATTCAA CTAAGGCTTA TGCACAAGCA CTTAAAGATA TTGAAGCTAA GCAAGCTACC CTAAACAGTT TATATGAACA GGGAAAATTG AGTGCTGATG ATTTAGTTAC AGCTTCAGCT AATCTGCATC AAACTATCAA AGCTTACAAC GTCGAGGTGG ATAACAGTAA TGTTAAAGCC GTCACTCAAA CGGAATTAAC ATCTGCATTT ATCAGTAAGC GTAAAGAGTT ACAAACTCAG TACGAAAAGG GTTTGCTGAC CGAAAAAGAA CTCAATATTT CACTGCAAGA GTTAGCTGCA TCACATACTA AAGCCGTTGA GCAGTCGAAC AAATCTATTG CTGCGACAGG GTTGTTGTCT GATGCCCAGC TAGACTTGCA AGAAAAAATA TTAAGGACCG AGAAAGAGGT TCGTGATCTT GAAGCGGCTT TAAAAGATGA CAGTAAGGCC TCGGCTGAAC TGACTATCAT CAAGGCTAAG TTGGCTAAGG AAGAAGCCAA CTTAGCTGAT CTGAAGCGCG AGTCTGTTGA GCTATCCAAG ATAGAGAACG CGACCTATGT TGAACTGCTG ATATTGCAGC GTGACTATGA AGCGCAGCTT GAAGCATTGG ATCGAAATTT CAGGGCGGGT TTATTAACTA AGCAAGAGTA CGATGCTCAA TCACAAATAC TCAAAGGGAC GTTGAGTGAA GTCAATAAAG TGGTGGGTGA AAGCAGTAAA AAGACAGATG AAAATACCGA GGCAACGAAG GAAAACACTA AGGCCACTAA GGATAATACT GCCGCTGGTA TTGAAAATGC TAAAGTTATC GCGGAACAAT TAAGTACGAT TGATGACTTT AGGGGAAGTG CTGCCGCCAC TCGTGATGTG ATTGTTTCGC TGAATACCGA ATACGATTAC TCAAATGCCA CTATCCAAGC AATGACCGAA AGGTTAGCGC AATTGGATAA TCAAATTGCG GGTGCTGATC AAAAACGCGA ACGACGTGAA ATCAATAATG CCATTCGGAT GCGTGATTGG GTCACTCAAA TCGAGAGCGG CTCACTCAGC TTGCAAGAGC TAGGTGAGCT TGCTGATCTC GCTAATAACT CTGTTGTAAG GCTTTCTGAT AATCAGCTTG TTCCGCTCAA CAAAGCGATC GATGAAGCCC GTTCACGCTT TAGAGAATTG GCTGATGAAA TTAATAAAAC CACAATGGAT ATTCAAGACC GGCTCGATAC CGCTTTGGGC AACCAGAAGG ATATTGCTGA GCGTAAGTTT GCTAGTGAGC TAAAGGAAGT GAACGATTTA ATCACCACAG CTCAAGCATA CGGTGATAGT CAGCTCATCA ATAAACTGCA AAAAAGTCTT AGTGATCTTA AGCAGGCACA AGACTTAGAA CGTAAGGCCC TGCAGGCCCA GCAAGCAACC GATAAGCAAA GCGCTGCCGA GGCAAAGAAG CAAGCCGAAG CAAGTGCTAC GACTGCTAAA GCTGCGGCTC AAACTCAAGC AACTGCTACC GTTAACACGC AAGCCAACAC CCAAACCAGC ACGCAATCTG TGGCTAACAC TTCAGATATG CAAGTGCTGC AACTGCAGGT TGGCAATAGC ACCTTTAACG CCCAAATGAA GCGCAGCCTC GTCACTGAAT TGATGAACGA GATCAAACGC CTGCAATCTG TTGGCGGTTA G
|
Protein sequence | MSFKDQEVNL IIQGKDLFSA EAKKSEQALQ ELGRESEKLN EQLDDLKRQQ EAIKAIDSLT ESINKGERAY VDNAQALDKL KQEQKQANTE AKNLEKSQQD AAASTAKLET EYSQTAAQLA SYDSQLASAR AEVERLTTTQ NKGAQASQAQ AKALSAAKSD LQQLEAAQKN TATSATKLAN ELEQERSELT RLGTEVEKAG RNKAEYALKV KSARTELNQL GSSLGRNKAE LDKQQTVLNK AGIDMGKLAD ASQELKTKQA GAEAALKGVN DKLAQHDRLL VESKNSAKVA NAQTDLTTKA VSTLAKAYAV LLSAQQAVQT VKSGVENYGE LEAAITKVEK TTNLARDTVV KMADELKNLS ENVTPTSTNE LLRMAEVAGQ LGTKSTEDIL SLVAAADALG LSTNLAGDEA ATMLARILGM TQEGIPEIHN LSSAVVALGN DFAITEADIV QMTKEIVSGT REINLGSAAA AAFGTTLAEL GQPAERSRTA MQRLGAEINE ASKKGGDSLE RLTKITGLTA KQIEQDLGDA PEKVLVKFLE GLQKVKAEGG LVSDALKSMG IDGTEATGVL SVLADGTDRL KVALELSNKA YAAGDYHMKE AIKAYADQES AIGRLQNKFH GLTSEIGQAF SDETDAAIRA AGAALDAVDQ EVIKLLEHLP EIGKGFVELL GDVDNFIAGT SNSFETLDLT MGIFANGLNA IGVSVNSMTL ELSKLDTTQK TILAIASKIM GIEYVTAKQV EDSKLRSKEI QESITRDLDD ITNQTKRMKG ESSIAYEGLI KTAVKYRGSI DQLSIAQRNQ LNDILLSGKY NGDLEKTYRE LTATLVRANR ETEIEAEFKN KAADASKKKA EEDKKAAEAA DALAASQGAI NNSTKAYAQA LKDIEAKQAT LNSLYEQGKL SADDLVTASA NLHQTIKAYN VEVDNSNVKA VTQTELTSAF ISKRKELQTQ YEKGLLTEKE LNISLQELAA SHTKAVEQSN KSIAATGLLS DAQLDLQEKI LRTEKEVRDL EAALKDDSKA SAELTIIKAK LAKEEANLAD LKRESVELSK IENATYVELL ILQRDYEAQL EALDRNFRAG LLTKQEYDAQ SQILKGTLSE VNKVVGESSK KTDENTEATK ENTKATKDNT AAGIENAKVI AEQLSTIDDF RGSAAATRDV IVSLNTEYDY SNATIQAMTE RLAQLDNQIA GADQKRERRE INNAIRMRDW VTQIESGSLS LQELGELADL ANNSVVRLSD NQLVPLNKAI DEARSRFREL ADEINKTTMD IQDRLDTALG NQKDIAERKF ASELKEVNDL ITTAQAYGDS QLINKLQKSL SDLKQAQDLE RKALQAQQAT DKQSAAEAKK QAEASATTAK AAAQTQATAT VNTQANTQTS TQSVANTSDM QVLQLQVGNS TFNAQMKRSL VTELMNEIKR LQSVGG
|
| |