| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1884 |
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| Symbol | |
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| ID | 4842190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 2182616 |
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| End bp | 2185129 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640119105 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001050259 |
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| Protein GI | 126174110 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGGA GGCCAAAAGT TAAGTCACAA CGCATGCAGC CACATAGACA TAATAGTCGC
CACAAAAAGC ACAGTGATCT GCAGATAAAG CGCAGGCTGG CATTGGAATA CCTTGTCCAC
AAGGGCGCCG CGCTAAAGCG TTGTCAGCTA CACGTCACTG GCATAGTGCA AGGGGTGGGA
TTTCGCCCCT TTGTCTATCG TTATGCCCTT GAATTTCAAC TAACAGGTAC TGTGCTCAAC
AATGCCAAGG GCGTGACCAT TGAGCTGCAA GGCACGGAAG AAAACCTCAC GCAATTTATC
ACAACGCTCA ATACCACCCC ACCGCCACTG GCCCGTATCG ACAATATCAC CCAAACACCG
CTGCCGATTT TATTAAGCGA AACCACATTT GAAATTATAA AAAGCGACAG CCATAAGGAC
GATGACCCAA GTTCACCGAT AGGTGCGCAG GTGGCGGTAT CTGCGGATAA AAGTACCTGC
CAAGATTGCT TGAACGACAT GCATAATCCT GATGATCGCC ACTTTGGCTA TGCTTTTACA
AACTGCACTA ACTGTGGCCC TCGATACACC ATAATCAATG CTTTACCCTA TGATAGACAC
AACACAGCCA TGGCCGATTT TGACATGTGC CCCGAGTGCG CCAAAGCATA TCAAAACCCA
CTCGACCGCC GCTATCATGC CCAGCCAGTC AGTTGCCCAG TCTGCGGCCC CAGACTCAGT
TTAAAAACAC CGCAAGGGGA ATACATCATT CTCAATACCT CAAATTTCAG CACACCTGAA
TTGAGTACGG ACCTTGCGGT ACTGACAGCG GCGGCTGACA GGTTACACCA AGGGCAGATT
CTGGCAATTA AGGGACTGGG CGGATTTCAC TTAATCTGTG ATGCCCGTAA CGACAATGCC
GTCAACACTC TTAGGCTGCG AAAACAGCGC CAAGCCAAGC CGCTAGCGGT GATGATGGCG
GATATCCAGA TGGCGCAGCA CTATGTCACA GGTACGGATG CCGAGTGGCA AGTACTGAGT
TCGCAGGAGC GGCCCATAGT GCTGATGAGC AGTCGCGCCG AACATGATCT CAGCTTAGCT
GTCGCCCCTA ATCTGAATAA ACTCGGGGTA TTTTTACCCT ACACACCGCT ACATCATTTA
CTGTTAGGTC TCTTCAAAGG GCCATTGGTC GCGACCAGCG CTAATGTGTC AGGTGAGCCT
ATCATCACAG ATTGTGACGA GCTTATTCGC CACTTAAGCC ATGTTATGGA TGCAATAGTT
GATCATAATC GGCCGATTAT TAATGGCTGT GATGACAGTG TGGTGCAGGT GATTCAGCCC
AACATGTATT TGCCTGCAGA GGTGCAAGTG CTGCGTCTCG CCCGTGGTTA TGCGCCCTTA
AGTTTTCCAC TTGATACACC GCTAACCCAA TCAATTTTGG CCGTGGGCGC ACAGCAAAAA
AATGCTATCG CCCTAGGCTT TGGCAACAAT GTGTTTTTAA GTCCCCATAT TGGCGATTTA
TTCAGTGTCA GCGCCGAGCA CTATTTTGAG CGCACCTTAG CGACCTTCGC GCGGCTGTAT
CACTTTGCGC CCAATCTCAT TGTTCGCGAT AAACACCCAG ATTATGCCCC CTCACGCTGG
GCTGAAATGC ACTCAAACTC AAATGTAGAA CTCAGCGATA CCTGCCAATG TTTAACTGTG
CAACATCACC ATGCCCATGT GCTCAGCGTG ATGGCGGTTA ATCAATACCG AGAACCTGTA
TTGGGTTTTA GTTTTGATGG CACAGGGCTT GGCGACGATG GCAGTTTATG GGGCGGTGAA
GTGTTATTAA CCACGCTCGA TAAAGCGCAG CGACTGGCCC ATTTTGAGCC CATAGCGCTG
CTGGGCGGCG AACAAGCCAT TAAGCAACCC GTGCGGTTGT TACTGGCATT ATTGTTCGAG
CAAATGAGCC TTGATGACGT GCTCGCGCTG AACTTGCCCA TTATCTCAAG CATGAGTCCA
AATACCTTAA CTAATTTATA TAAAATCTGG CAGAACGGTA GCGCGATAAA AACCTCCTCT
GTCGGGCGAC TGTTCGATGC CCTCGCCTGC GCCTTAGGCT TAATCGAAAC CACACTGTTT
GAAGGTCAAG CGGGAATGGC GATAGAAGCC GCGGCCAATC GCGCCGATGC AATAGCCCTT
GAAGCCATGT CGCTTAACTT ACCTCTTGAC GTCGACCAGT GGCGCAGCAG TGAAATGTTC
AAGCAGATTG TTAAATTAAT GACTGAAAAA CCGCTAACGG ACAACAGACG AGATGCCATC
GCCCGCGCCT TTCTACACAC ATTAGGTGAT GCTATCTGTG ATTATGCAGC CCAGTATCAA
CACATCCCAA CCGTGCTCTG CGGCGGCGTA TTCCAAAATA AATACCTATT GGAATATTGC
CTGAGCAAAC TCTGGGCCCA AGGCAATAAA GTGTTATCCA GTCAACAGAT CCCCATCAAT
GATGGCGGCA TCGCCCTAGG CCAACTCTGG TATGGCATTC ATCAGAATCA ATAA
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| Protein sequence | MIRRPKVKSQ RMQPHRHNSR HKKHSDLQIK RRLALEYLVH KGAALKRCQL HVTGIVQGVG
FRPFVYRYAL EFQLTGTVLN NAKGVTIELQ GTEENLTQFI TTLNTTPPPL ARIDNITQTP
LPILLSETTF EIIKSDSHKD DDPSSPIGAQ VAVSADKSTC QDCLNDMHNP DDRHFGYAFT
NCTNCGPRYT IINALPYDRH NTAMADFDMC PECAKAYQNP LDRRYHAQPV SCPVCGPRLS
LKTPQGEYII LNTSNFSTPE LSTDLAVLTA AADRLHQGQI LAIKGLGGFH LICDARNDNA
VNTLRLRKQR QAKPLAVMMA DIQMAQHYVT GTDAEWQVLS SQERPIVLMS SRAEHDLSLA
VAPNLNKLGV FLPYTPLHHL LLGLFKGPLV ATSANVSGEP IITDCDELIR HLSHVMDAIV
DHNRPIINGC DDSVVQVIQP NMYLPAEVQV LRLARGYAPL SFPLDTPLTQ SILAVGAQQK
NAIALGFGNN VFLSPHIGDL FSVSAEHYFE RTLATFARLY HFAPNLIVRD KHPDYAPSRW
AEMHSNSNVE LSDTCQCLTV QHHHAHVLSV MAVNQYREPV LGFSFDGTGL GDDGSLWGGE
VLLTTLDKAQ RLAHFEPIAL LGGEQAIKQP VRLLLALLFE QMSLDDVLAL NLPIISSMSP
NTLTNLYKIW QNGSAIKTSS VGRLFDALAC ALGLIETTLF EGQAGMAIEA AANRADAIAL
EAMSLNLPLD VDQWRSSEMF KQIVKLMTEK PLTDNRRDAI ARAFLHTLGD AICDYAAQYQ
HIPTVLCGGV FQNKYLLEYC LSKLWAQGNK VLSSQQIPIN DGGIALGQLW YGIHQNQ
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