Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2303 |
Symbol | |
ID | 7087717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2746821 |
End bp | 2749106 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643461201 |
Product | alpha amylase catalytic region |
Protein accession | YP_002358225 |
Protein GI | 217973474 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.283065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0722079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCTTTT TATCACCTAT CGATTCCAGA GTGACTCAGA TCCAACAAGC GGCTAAATTT CCCATCGTAG CTTTACTGAC CAAAGCGGCG AAAGCCCCGC AGCGCCGACA GTCGCGGCAT TCATCACTCA ATTTATGTCT ACAGTCTTTG TTTAATGCCT CTTTATCTAG TGCAGCTTTA TTAACTGCCT CGCTTTTTTG CTTATCGGCA AATGCAAATG CATCGGCGCA GGCGCTTGAT AATGAGTTAC AGCCAAAGTC AGAGAGTGAG ATTATGACGC TAAAACCTGT GGTGTATCAG ATTTTTACTC GCCTTTATGG CAATAAAAAC CCAACGAATA AACCTTGGGG CACAATTGCC GACAACGGCG TCGGCAAATT TAATGATATC GACGATGTTG CACTCAATAG CATCAAGGAC CTAGGCGTCA CCCATGTGTG GTACACGGGC GTTCCGCACC ATGCATTGAT TGGTGATTAC AGTGAGATTG GCGTAAGTGC AGATGATCCT GATGTGGTAA AAGGCCGCGC AGGATCCCCC TACGCAGTCA AAGATTACTA CAACGTCAAT CCCGATCTGG CGGTCAATCC TGCCAACCGT TTAGCCGAGT TCGAGGCGCT CATTGCCCGT ACCCATCAAC ACGGCTTAAA GGTGATTATC GATATCGTGC CAAACCATGT GGCGCGCCAT TATCAATCCG TCAGTAAACC CCAAGGCGTG CGCGATTTTG GCGAAGATGA TGATACCAGT CTGGAGTACG ACAAAAACAA CAACTTCTAT TACGTCGTTG ATAACAGTGT GAAGGGAACG AAAGGACAAG CGCATGCCTT TGAGGTGCCA AGCTTACCCG CAGAGCTTAA ACCACTGGGC GCAGAAACCA ACCCCTTAAG TGACGGTAAA TTCGACGAAT TTCCCGCAAA GTGGACCGGC AATGGCTCAC GCTTAGCCAA GCCCGATGCT AATGATTGGT ACGAGACAGT TAAGATTAAT TACGGCGTGC GCCCCGATGG CACCTATGAC TTCCCTCGCC TGCCAGCTAC ATTCGCCACT TTTACTGAAG CGCAGCATTA CGCTTTCTGG CAACAACATT TAGCCGAGAT CCCAAGCTCT TGGATTAAAT TCAATCAGAT TGCCCAATAT TGGCTTGCAA AAGGTGTCGA TGGGTTTCGA TACGATATGG CCGAAATGGT GCCAGTGGAG TTTTGGAGTT ACCTCAACAG CCAGATAAAA CACACTAATC CCGATGCCTT TATCTTGGCC GAGGTCTATA ACCCTAAGTT GTACCGAGAT TATATCCAGC TTGGAAAAAT GGATTATCTG TACGATAAGG TCGATCTTTA CGACACCCTA AAAGCCGTGA TGGCAGGTAA AACCAGCACA GCTAATATCG CGGCGGATCA GGCAAAAGTG CACGATATTG AATCCCACAT GCTGCACTTT TTAGAGAACC ACGACGAGCA ACGTATTGGT AATGCAGTTT TTTTAGCATC GCTACAAACA AATAAACCAA CGAATAGCTC CCTAGAAACC CAAGCCGTAA ATCCACACTA TGCCCTGCCA GCCATGGTAG TGTCGGCAAC GATAGGCACT TCACCAACGT CAGTGTATTT TGGCCAAGAA GTGGGAGAAG CCGCCATCGA CAATCCAGGC TTTGGTCATG CATCACGCAC CAGTATTTTT GACTATGTTG GTGTCCCCGC CCATCAGCGC TGGATGAACA ATGGCAAGTT TGATGGTGGA CAATCAACGG CGCTGGAAAA ATCACTGCGG GCTTACTATC AAAAGCTATT AAAATTAAGC ACAGGCCAAA CGGCGCCTGC ACTGTTAGGC CAATATTATT CACTCGATGC CGCGAATAGC AGCAAGAATG ATGCGACTGA AAGTAACAGC GCTCAAAGTA TGAGTACTCA AAAGAGCACT GCAAACGAAA CAGGCTATGA CGACAGCACC TTCGCCTTTG CCCGCTTCGA GGTGATATCT CCGACCTCAG AGCAGACTCA AAAGTTGATT GTGGTCAGTA ACTTCAGTCA GACCGAATCA AAAGCCTTAC AGCTCAAACT CCCCAAAGAG CTCATACGTC AGTGGCAATT AAAGGACGGC GTATATGCGC TTAAGGATTT ACTCGAAGAT CATCAAACAA GCCAGCTGCA GCTTGAACAA GGCGAAGGCA AGATAGCGCT CACCCTAGCC CCGCTGTCGT CGGCGATTCT CTCGCTCACC GTTGTAGCAG ATGAGCGGAA AAGTGAGTCT GCAAATAAGT CGCTGAATGA GCAAGCAGCT GAATAA
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Protein sequence | MSFLSPIDSR VTQIQQAAKF PIVALLTKAA KAPQRRQSRH SSLNLCLQSL FNASLSSAAL LTASLFCLSA NANASAQALD NELQPKSESE IMTLKPVVYQ IFTRLYGNKN PTNKPWGTIA DNGVGKFNDI DDVALNSIKD LGVTHVWYTG VPHHALIGDY SEIGVSADDP DVVKGRAGSP YAVKDYYNVN PDLAVNPANR LAEFEALIAR THQHGLKVII DIVPNHVARH YQSVSKPQGV RDFGEDDDTS LEYDKNNNFY YVVDNSVKGT KGQAHAFEVP SLPAELKPLG AETNPLSDGK FDEFPAKWTG NGSRLAKPDA NDWYETVKIN YGVRPDGTYD FPRLPATFAT FTEAQHYAFW QQHLAEIPSS WIKFNQIAQY WLAKGVDGFR YDMAEMVPVE FWSYLNSQIK HTNPDAFILA EVYNPKLYRD YIQLGKMDYL YDKVDLYDTL KAVMAGKTST ANIAADQAKV HDIESHMLHF LENHDEQRIG NAVFLASLQT NKPTNSSLET QAVNPHYALP AMVVSATIGT SPTSVYFGQE VGEAAIDNPG FGHASRTSIF DYVGVPAHQR WMNNGKFDGG QSTALEKSLR AYYQKLLKLS TGQTAPALLG QYYSLDAANS SKNDATESNS AQSMSTQKST ANETGYDDST FAFARFEVIS PTSEQTQKLI VVSNFSQTES KALQLKLPKE LIRQWQLKDG VYALKDLLED HQTSQLQLEQ GEGKIALTLA PLSSAILSLT VVADERKSES ANKSLNEQAA E
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