Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4714 |
Symbol | |
ID | 5756548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_010000 |
Strand | + |
Start bp | 44621 |
End bp | 45109 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641291070 |
Product | conjugative transfer signal peptidase TraF |
Protein accession | YP_001557128 |
Protein GI | 160873123 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4959] Type IV secretory pathway, protease TraF |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCTTAA TGCTGATCGC TACCGTCATT ATGTATGGTG TGGGGATCAG AATTAATTTC AGCCACTCAT ACCCCCCTGG GATTTATCTT GTTTCAAAGG CTCACGTTTA CGAGCGTAAT GATCTGGTCC TGTTTTGCCC TCCCAATAAT GCCGCTATCC ACACAGCAAA AGCGCGTGAT TACATCCGCT CTGGTCGCTG TGACAGTAGC ACAGTTCCCA TGATTAAACG GATTGTGGGA CTCGCCGGCG AGCGTGTGGA GTTTACCCCA ACCATCTTAA TCAATGGCGT CGCCCTTACA GACTCTGAGC GCCTTATTAC GGATAGTCAG CATCGACCGT TAACACAACT TCCAAATTTT ATGATCCCTG AGAACAGCTT TTTTGCTTAT TCAGACCATG CCCCAAAAAC CTCATTTGAT AGCCGCTATT TTGGTGCTGT TCCGATGACC AACATCATTG GCCATATCGC CCCTCTCTAT ATATTTTAA
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Protein sequence | MGLMLIATVI MYGVGIRINF SHSYPPGIYL VSKAHVYERN DLVLFCPPNN AAIHTAKARD YIRSGRCDSS TVPMIKRIVG LAGERVEFTP TILINGVALT DSERLITDSQ HRPLTQLPNF MIPENSFFAY SDHAPKTSFD SRYFGAVPMT NIIGHIAPLY IF
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