Gene SbBS512_E3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3962 
Symbol 
ID6269912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3697159 
End bp3697386 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content41% 
IMG OID641727809 
ProductyiaA/B two helix domain family protein 
Protein accessionYP_001882242 
Protein GI187730243 
COG category[S] Function unknown 
COG ID[COG4682] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCT CAAAAACTGT GGCAAAACTA TTATTTGTTG TCGGGGCGCT GGTTTATCTG 
GTTGGGCTAT GGATCTCATG CCCATTGCTA AGTGGAAAAG GCTATTTTCT TGGCGTGTTA
ATGACAGCAA CTTTTGGTAA CTATGCATAT CTTCGCGCAG AAAAACTCGG GCAACTGGAT
AATTTTTTTA CCCATATCTG CCAGTTGGTA ATGACTCCAA CTTACTGA
 
Protein sequence
MKTSKTVAKL LFVVGALVYL VGLWISCPLL SGKGYFLGVL MTATFGNYAY LRAEKLGQLD 
NFFTHICQLV MTPTY