Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2993 |
Symbol | |
ID | 6272077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2794397 |
End bp | 2794816 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641726930 |
Product | diguanylate cyclase (GGDEF) domain protein, truncated |
Protein accession | YP_001881395 |
Protein GI | 187731886 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0213133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAAACA ATTCCGATGC CCGAAAAACG TCGGCGTTAC TATTTCTTGA TGGCGATAAT TTCAAATATA TCAATGATAC CTGGGGTCAT GCGACGGGCG ATAGGGTCTT GATTGAAATC GCAAAACGGT TAGCTGAATT TGGCGGGCTG CGACATAAAG CATACCGCCT GGGCGGCGAT GAATTCGCTA TGGTGCTCTA TGATGTACAG TCGGAATCTG AAGTGCAACA GATATGCTCA GCACTGACAC AAATCTTTAA TCTCCCGTTT GATCTTCATA ATGGCCATCA GACCACCATG ACATTAAGCA TTGGTTACGC GATGACCATT GAGCACGCCT CTGCGGAAAA ATTACAAGAG CTTGCCGATC ACAATATGTA TCAGGCCAAA CACCAGCGTG CCGAAAAGCT GGTGAGATAG
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Protein sequence | MINNSDARKT SALLFLDGDN FKYINDTWGH ATGDRVLIEI AKRLAEFGGL RHKAYRLGGD EFAMVLYDVQ SESEVQQICS ALTQIFNLPF DLHNGHQTTM TLSIGYAMTI EHASAEKLQE LADHNMYQAK HQRAEKLVR
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