Gene SbBS512_E2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2993 
Symbol 
ID6272077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2794397 
End bp2794816 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content46% 
IMG OID641726930 
Productdiguanylate cyclase (GGDEF) domain protein, truncated 
Protein accessionYP_001881395 
Protein GI187731886 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0213133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAAACA ATTCCGATGC CCGAAAAACG TCGGCGTTAC TATTTCTTGA TGGCGATAAT 
TTCAAATATA TCAATGATAC CTGGGGTCAT GCGACGGGCG ATAGGGTCTT GATTGAAATC
GCAAAACGGT TAGCTGAATT TGGCGGGCTG CGACATAAAG CATACCGCCT GGGCGGCGAT
GAATTCGCTA TGGTGCTCTA TGATGTACAG TCGGAATCTG AAGTGCAACA GATATGCTCA
GCACTGACAC AAATCTTTAA TCTCCCGTTT GATCTTCATA ATGGCCATCA GACCACCATG
ACATTAAGCA TTGGTTACGC GATGACCATT GAGCACGCCT CTGCGGAAAA ATTACAAGAG
CTTGCCGATC ACAATATGTA TCAGGCCAAA CACCAGCGTG CCGAAAAGCT GGTGAGATAG
 
Protein sequence
MINNSDARKT SALLFLDGDN FKYINDTWGH ATGDRVLIEI AKRLAEFGGL RHKAYRLGGD 
EFAMVLYDVQ SESEVQQICS ALTQIFNLPF DLHNGHQTTM TLSIGYAMTI EHASAEKLQE
LADHNMYQAK HQRAEKLVR