Gene SbBS512_E0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0895 
Symbol 
ID6269402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp835372 
End bp836145 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content54% 
IMG OID641725057 
Productphage portal protein, lambda family 
Protein accessionYP_001879584 
Protein GI187730057 
COG category[R] General function prediction only 
COG ID[COG5511] Bacteriophage capsid protein 
TIGRFAM ID[TIGR01539] phage portal protein, lambda family 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGCAG CGACGATTGA AAGTGACCTT GATACCGAAA AGGCCTTTGA ATATATCGCC 
GGTGCGCCGC AGGGGCAGAA GGATAATCCG CTTATTAATA TTCTGGATAA GTTCTCCACC
TGGTATGACA CGAATAGCGT GATGCTGGGC GGTGTCAAAA TTCCGCACCT TTTCCCCGGT
GATGATCTGA AACTTCAGAC CGCGCAGGAT TCAGACAATG GATTTTCGGC GCTTGAACAG
GCGCTGCTGC GGTATATCGC CGCCGGTCTT GGCGTTTCCT ACGAACAGTT GTCCCGTGAT
TACTCGAAGG TCAGTTACTC AAGTGCCCGC GCATCCGCCA ATGAGTCGTG GCGCTATTTT
ATGGGGCGGC GAAAATTTAT TGCGTCCCGG CTGGCCACGC AGATGTTTTC CTGCTGGCTG
GAAGAGGCAC TTCTTCGGGG GATTATTCGT CCGCCACGGG CACGGTTTGA TTTTTATCAG
GCGCGATCAG CCTGGTCACG GGCTGAGTGG ATTGGAGCCG GAAGAATGGC CATTGACGGG
CTCAAGGAGG TTCAGGAATC AGTGATGCGC ATTGAGGCCG GACTGAGCAC GTATGAGAAA
GAGCTGGCGC TGATGGGCGA GGATTATCAG GACATTTTCT GCCAACAGGT CAGGGAATCT
GCAGAGCGGG AAAAAGCCGG ACTCTCACGT CCGGTGTGGA TAGCGCAGGC GTATCAGCAG
CAGATAGCGG AGAGTCGCAG GCCGGAAGAG GAGACAACAC CACGTGAGAC GTAA
 
Protein sequence
MYAATIESDL DTEKAFEYIA GAPQGQKDNP LINILDKFST WYDTNSVMLG GVKIPHLFPG 
DDLKLQTAQD SDNGFSALEQ ALLRYIAAGL GVSYEQLSRD YSKVSYSSAR ASANESWRYF
MGRRKFIASR LATQMFSCWL EEALLRGIIR PPRARFDFYQ ARSAWSRAEW IGAGRMAIDG
LKEVQESVMR IEAGLSTYEK ELALMGEDYQ DIFCQQVRES AEREKAGLSR PVWIAQAYQQ
QIAESRRPEE ETTPRET