Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_D0001 |
Symbol | |
ID | 6273323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010659 |
Strand | + |
Start bp | 352 |
End bp | 1287 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641728677 |
Product | Rep protein |
Protein accession | YP_001883068 |
Protein GI | 187734271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.709461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG CGCTTCAATA CTTCGAAGAA AATTTACCCC ACCGTCCCTA TCACACGGAT GATCTCGCTT TCGGTCTTCG TATCTCCGGC AAAGGGCGTG CGCTGCTTGC TCGCTACATC CAGCAAAATC AGCCTCATGC GCAGTTCTGG CTGGTTTTTG ACGTTGACCG AGTAGGAGCT GCGATTGACT GGAGCGACCG GAACGCCCCC GCGCCGAACA TCACCGTAAA AAATCCCGAG AACGGGCACG CTCACCTGCT CTACGCGCTC AATCTTGCCG TGAGAACCGC GCCTGATGCG TCGGTTAAGG CGCTGAAATA CGCCGCTGCA ATTGAACGTG CGCTGTGTGA GAAACTTGAC GCAGATGTGA ACTACAGCGG ACTGATTTGC AAAAATCCGT TCCACCTGGA ATGGCAGGTG ATGGAGTGGC GCGAGGAAGC CTACGCCCTC GATGAACTGG CTGATTATCT CGATTTGAGA GCCTCAGAGC GTCGTAGCGT CGATAAACAT TACGGGCTGG GGCGAAACTG CCATCTGTTC GAAATGACGC GCAAATGGGC TTACAGGGCG ATTCGTCAGG GCTGGCCAGC ATTCTCACAG TGGCTTGATG CTGTGATTCA GCGTGTCGAA ATGTACAACG CATCGCTTCC CGTTCCGCTT TCTCCGCCTG AATGTCGGGC TATTGGCAAG AGCATTGCGA AATACACGCA CAGGAACTTC ACGCCGGAAA GTTTCGCACA GTATGTGGCT GATACGCACA CACCAGAAAT ACAGGCCAAG AGAGGCCGGA AAGGTGGCAT CGCTAAAGGC GAAGCCTACG ATGACAAGCG TTTCATGGCG CTATGTATGC TGGAGAATGG ATATTCTCAG AAAGCTATTG CGGCGATGCT GAATGTACAT CGTAATACGA TCCGTAATTG GGCAATGCAC AAATAG
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Protein sequence | MSAALQYFEE NLPHRPYHTD DLAFGLRISG KGRALLARYI QQNQPHAQFW LVFDVDRVGA AIDWSDRNAP APNITVKNPE NGHAHLLYAL NLAVRTAPDA SVKALKYAAA IERALCEKLD ADVNYSGLIC KNPFHLEWQV MEWREEAYAL DELADYLDLR ASERRSVDKH YGLGRNCHLF EMTRKWAYRA IRQGWPAFSQ WLDAVIQRVE MYNASLPVPL SPPECRAIGK SIAKYTHRNF TPESFAQYVA DTHTPEIQAK RGRKGGIAKG EAYDDKRFMA LCMLENGYSQ KAIAAMLNVH RNTIRNWAMH K
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