11 homologs were found in PanDaTox collection
for query gene SbBS512_D0001 on replicon NC_010659
Organism: Shigella boydii CDC 3083-94



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010659  SbBS512_D0001  Rep protein  100 
 
 		 311 aa  651    Shigella boydii CDC 3083-94  Bacteria  normal  0.709461  n/a   
 
 
-
 
NC_011093  SeSA_C0001  replication protein  92.6 
 
 		 311 aa  605  9.999999999999999e-173  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  n/a   
 
 
-
 
NC_009516  PsycPRwf_2392  plasmid replicase  35.05 
 
 		 409 aa  180  2.9999999999999997e-44  Psychrobacter sp. PRwf-1  Bacteria  decreased coverage  0.000895124  n/a   
 
 
-
 
NC_007968  Pcryo_2482  plasmid replicase  39.15 
 
 		 293 aa  174  1.9999999999999998e-42  Psychrobacter cryohalolentis K5  Bacteria  normal  0.988866  normal  1 
 
 
-
 
NC_004253  pDOJH10S_p1  hypothetical protein  35.52 
 
 		 303 aa  136  5e-31  Bifidobacterium longum DJO10A  Bacteria  normal  0.170551  n/a   
 
 
-
 
NC_011083  SeHA_C1599  replication protein A  31.31 
 
 		 413 aa  117  3e-25  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A3944  putative replicase  30.29 
 
 		 332 aa  110  4.0000000000000004e-23  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00660713  hitchhiker  0.00266774 
 
 
-
 
NC_004633  PSPTOA0001  replication protein RepA  33.63 
 
 		 437 aa  103  3e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_0441  plasmid replicase  31.02 
 
 		 319 aa  103  3e-21  Ralstonia pickettii 12J  Bacteria  hitchhiker  0.00642051  hitchhiker  0.000000000000359119 
 
 
-
 
NC_004632  PSPTO_B0001  RepA protein, putative  33.63 
 
 		 457 aa  103  4e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.93501  n/a   
 
 
-
 
NC_008738  Maqu_4179  plasmid replicase  32.1 
 
 		 433 aa  70.5  0.00000000004  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
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