16 homologs were found in PanDaTox collection
for query gene SbBS512_A0170 on replicon NC_010660
Organism: Shigella boydii CDC 3083-94



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010660  SbBS512_A0170  type III secretion apparatus needle protein mxiH  100 
 
 
83 aa  169  2e-41  Shigella boydii CDC 3083-94  Bacteria  normal  0.0101103  n/a   
 
 
-
 
NC_011080  SNSL254_A3078  type III secretion apparatus needle protein  69.44 
 
 
80 aa  101  3e-21  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000627693 
 
 
-
 
NC_011083  SeHA_C3062  type III secretion apparatus needle protein  69.44 
 
 
80 aa  101  3e-21  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.58086  normal  0.170696 
 
 
-
 
NC_011094  SeSA_A3026  type III secretion apparatus needle protein  69.44 
 
 
80 aa  101  3e-21  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.504862  hitchhiker  0.00772471 
 
 
-
 
NC_011149  SeAg_B2995  type III secretion apparatus needle protein  69.44 
 
 
80 aa  101  3e-21  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00251179  n/a   
 
 
-
 
NC_011205  SeD_A3183  type III secretion apparatus needle protein  69.44 
 
 
80 aa  101  3e-21  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.587699 
 
 
-
 
NC_011353  ECH74115_4133  type III secretion apparatus needle protein  59.74 
 
 
79 aa  94.4  4e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.00116723 
 
 
-
 
NC_009800  EcHS_A3010  type III secretion apparatus needle protein  63.77 
 
 
71 aa  93.6  7e-19  Escherichia coli HS  Bacteria  hitchhiker  0.00000110962  n/a   
 
 
-
 
NC_010468  EcolC_0852  type III secretion system needle protein  63.77 
 
 
71 aa  93.6  7e-19  Escherichia coli ATCC 8739  Bacteria  normal  0.165297  normal 
 
 
-
 
NC_006349  BMAA1548  type III secretion system protein BsaL  49.35 
 
 
89 aa  81.3  0.000000000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_2056  type III secretion system protein BsaL  49.35 
 
 
89 aa  81.3  0.000000000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2180  type III secretion system needle protein  49.35 
 
 
89 aa  81.3  0.000000000000004  Burkholderia pseudomallei 668  Bacteria  normal  0.779344  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2092  type III secretion system needle protein  49.35 
 
 
89 aa  81.3  0.000000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.430647  n/a   
 
 
-
 
NC_009079  BMA10247_A0735  type III secretion system protein BsaL  49.35 
 
 
89 aa  81.3  0.000000000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  0.361974  n/a   
 
 
-
 
NC_007650  BTH_II0825  type III secretion system needle protein  48.05 
 
 
89 aa  77.4  0.00000000000007  Burkholderia thailandensis E264  Bacteria  normal  0.247423  n/a   
 
 
-
 
NC_010157  YpAngola_B0057  type III secretion apparatus needle protein YscF  26.76 
 
 
87 aa  41.2  0.005  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
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