| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0115 |
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| Symbol | |
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| ID | 6273507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | - |
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| Start bp | 72670 |
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| End bp | 74931 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641728762 |
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| Product | tonB-dependent receptor |
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| Protein accession | YP_001883153 |
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| Protein GI | 187734496 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 111 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTTA TAAAACTGGC TATCGGCTCA GGCATATTAT TGCTCAGCTG CGGTGCTTAC
TCACAATCCA TCAGTGAAAA AACTAATTCC GACAAAAAAG GAGCGGCAGA ATTCAGTCCG
CTCAGCGTTT CTGTCGGGAA GACGACCAGT GAGCAGGAAG CTCTCGAGAA AACAGGCGCG
ACCAGTTCCC GGACAACGGA CAAAAACCTG CAATCACTTG ACGCAACAGT GCGTAGTATG
CCTGGTACTT ATACTCAAAT AGATCCTGGT CAGGGAGCAA TCAGTGTGAA TATTCGAGGC
ATGAGCGGAT TTGGTCGTGT AAACACTATG GTCGATGGTA TTACCCAGAG TTTTTACGGA
ACCTCTACCT CCGGAACAAC GGCGCATGGT TCAACTAACA ATATGGCTGG CGTACTTATA
GATCCTAACT TACTGGTAGC AGTTGATGTT ACACGCGGTG ACAGCAGTGG CTCTGAAGGG
ATCAACGCCC TTGCCGGTAG TGCAAATATG CGTACTATTG GCGTTGACGA TGTAATATTT
AACGGTAATA CATATGGCCT TCGTTCACGT TTCTCTGTCG GTAGTAATGG GCTGGGACGC
AGCGGAATGA TCGCCCTTGG TGGAAAAAGC GACGCTTTTA CGGATACGGG AAGCATTGGC
GTTATGGCTG CTGTGAGCGG CAGTTCTGTG TACTCTAATT TCTCAAATGG TTCTGGAATT
AACAGCAAAG AGTTTGGTTA TGATAAATAT ATGAAGCAGA ACCCCAAATC CCAACTGTAT
AAAATGGATA TCAGACCAGA CGAATTTAAC AGCTTCGAAC TTTCCGCTCG AACCTATGAA
AATAAATTTA CACGTCGTGA TATAACCAGT GACGACTATT ACATTAAATA TCATTACACC
CCTTTTTCTG AATTAATTGA CTTTAACGTA ACGGCCAGTA CCAGTCGCGG TAATCAAAAG
TATCGTGATG GCTCGCTGTA TACTTTCTAC AAAACCTCAG CGCAAAATCG TTCTGACGCG
CTGGATATCA ACAATACCAG CCGGTTCACT GTCGCGGACA ATGAACTGGA GTTTATGCTG
GGCAGCAAAC TGATGCGTAC CCGCTATGAC CGGACCATTC ACTCAGCGGC GGGCGACCCG
AAAGCGAACC AGGAATCGAT CGAGAACAAT CCGTTCGCAC CCTCCGGCCA GCAGGATATT
TCAGCGCTGT ATACCGGGCT GAAGGTTACG CGCGGCATCT GGGAGGCAGA TTTCAATCTC
AACTACACAC GTAACAGGAT CACAGGGTAC AAGCCCGCCT GCGATTCACG CGTTATCTGC
GTGCCACAGG GTAGCTACGA TATTGACGAT AAAGAGGGTG GCTTCAACCC TTCAGTTCAG
CTTTCTGCTC AGGTAACACC ATGGCTTCAG CCGTTCATTG GCTACAGCAA ATCCATGCGT
GCCCCGAACA TCCAGGAGAT GTTCTTCTCT AATTCAGGAG GCGCATCCAT GAACCCATTC
CTGAAGCCTG AACGTGCAGA AACCTGGCAG GCGGGTTTTA ACATTGATAC CAGAGATTTA
CTGGTCGAAC AGGATGCCCT GCGCTTTAAG GCTCTGGCGT ACCGCAGCAG GATCCAGAAC
TACATCTACA GCGAGTCTTA TCTGGTTTGT TCTGGAGGTC GTAAATGCAG TATGGCTGAG
GTGATTGGCA ATGACTGGGA GGGCATTAGC GATGAATACA GCGACAATAT GTACATCTAC
GTTAACTCGG CAAGCGACGT TATTGCAAAG GGCTTCGAAC TGGAGATGGA TTATGATGCA
GGTTTTGCTT TTGGCCGACT CTCTTTCAGC CAGCAGCAAA CAGACCAGCC AACCTCCATC
GCCAGCACCT ACTTTGGCGC AGGGGATATG ACCGAACTGC CCAGAAAATA CATGACGCTG
GATACTGGTG TTCGCTTCTT CGATAACGCG TTGACCCTGG GCACTATCAT AAAATACACA
GGCAAGGCTC GTCGCCTGTC GCCTGATTTT GAGCAGGACG AACATACCGG CGCAATAATC
AAACAGGATT TGCCGCAGAT CCCAACGATT ATCGATCTCT ATGGTACTTA CGAGTACAAC
CGCAACCTGA CACTGAAACT TTCGGTACAA AACCTGATGA ACAGAGATTA TTCGGAGGCG
CTGAATAAGC TCAACATGAT GCCAGGTCTT GGTGACGAGA GCCACCCAGC CAATTCCGCG
CGTGGCAGAA CATGGATATT TGGCGGGGAC ATTCGTTTCT GA
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| Protein sequence | MNVIKLAIGS GILLLSCGAY SQSISEKTNS DKKGAAEFSP LSVSVGKTTS EQEALEKTGA
TSSRTTDKNL QSLDATVRSM PGTYTQIDPG QGAISVNIRG MSGFGRVNTM VDGITQSFYG
TSTSGTTAHG STNNMAGVLI DPNLLVAVDV TRGDSSGSEG INALAGSANM RTIGVDDVIF
NGNTYGLRSR FSVGSNGLGR SGMIALGGKS DAFTDTGSIG VMAAVSGSSV YSNFSNGSGI
NSKEFGYDKY MKQNPKSQLY KMDIRPDEFN SFELSARTYE NKFTRRDITS DDYYIKYHYT
PFSELIDFNV TASTSRGNQK YRDGSLYTFY KTSAQNRSDA LDINNTSRFT VADNELEFML
GSKLMRTRYD RTIHSAAGDP KANQESIENN PFAPSGQQDI SALYTGLKVT RGIWEADFNL
NYTRNRITGY KPACDSRVIC VPQGSYDIDD KEGGFNPSVQ LSAQVTPWLQ PFIGYSKSMR
APNIQEMFFS NSGGASMNPF LKPERAETWQ AGFNIDTRDL LVEQDALRFK ALAYRSRIQN
YIYSESYLVC SGGRKCSMAE VIGNDWEGIS DEYSDNMYIY VNSASDVIAK GFELEMDYDA
GFAFGRLSFS QQQTDQPTSI ASTYFGAGDM TELPRKYMTL DTGVRFFDNA LTLGTIIKYT
GKARRLSPDF EQDEHTGAII KQDLPQIPTI IDLYGTYEYN RNLTLKLSVQ NLMNRDYSEA
LNKLNMMPGL GDESHPANSA RGRTWIFGGD IRF
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