Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_1854 |
Symbol | |
ID | 5167341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | - |
Start bp | 1978501 |
End bp | 1979070 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640566195 |
Product | integrase catalytic subunit |
Protein accession | YP_001247218 |
Protein GI | 148268275 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.578694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTA AATACAAAAA TCATCAAATA GAAACTAATG AAAAACGAAT TAAAAATCAT TTGAATCGCG CTTTTAATAG AGAACAACCA ATGGAGACAT TAGTAAGTGA TTTGACATAT GTAAAAGTCG GAGGAACATG GCATTACATA TGTTTATTTA TAGATCTATT TAATAGAGAA ATTGTTGGTT ACAGTGCAGG TAAAAATAAG GACGCCAATT TAGTATCAAA AGCAATCAGC AGAATAAATC ATAATCTTGA ACAAATCAAA CTATTCCACA CTGATAGAGA CAAAGAATTT GATAATCATT TGATAGATGA AGTCCTAGAA ACATTTAAAA TAAAACGTTC ATTAAGTACC AAAGGTTGTC CTTATGATAA CGCAGTTGCG GAAGCAACGA TGAAAGCAAT GAAAACAGAA TTTGTAAAAC AAATGCAATT TGAAAACTTA GAACAGTTAG AAACAGAATT ATTTGATTAT GTAAATTGGT ACAACAATTT TAGACCACAT TCTTCATTAC AGTATTTGAC GCCAGTGGCA TTTAAAAATA TACACATGAA AACTGTCTAA
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Protein sequence | MKAKYKNHQI ETNEKRIKNH LNRAFNREQP METLVSDLTY VKVGGTWHYI CLFIDLFNRE IVGYSAGKNK DANLVSKAIS RINHNLEQIK LFHTDRDKEF DNHLIDEVLE TFKIKRSLST KGCPYDNAVA EATMKAMKTE FVKQMQFENL EQLETELFDY VNWYNNFRPH SSLQYLTPVA FKNIHMKTV
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