Gene Saro_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3856 
Symbol 
ID5077467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp24732 
End bp25163 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content67% 
IMG OID640480965 
Producthypothetical protein 
Protein accessionYP_001165627 
Protein GI146275466 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.515837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGGG TGGTTTCGGT CCGGACGGTA GGCCACGAAC TGGCGCTCAA GGCAGCGGCT 
GCCGCCGTTG CCACGGGTGC GGCGGCGGGC TGTCCGGTCG TTGCCGCGGT GGTCGGCGCC
GGGGGAGATC TGGTCGCGTT CGTCCGCGCC AGCGGCTCCC CTTCGCCATC CGCAAAGATC
GCGCAAGATA AGGCTTACAG CGCCGCCAGC TTCCGCGTCC CGACGCCGGA TCTCTATGCG
ATGGTTTCCG GCAATCCGGC CCTGCGCGAC GGAATCGTCG CGCAGCCGGG ATTAGCAATG
TTCGGCGGCG GCCTGCCGAT CGAAATCGCC GGTGTATTCG TCGGTGCGAT CGGTGTTTCC
GGCGGGAGCG AAGCGATGGA CGTCGAATAC GCCAACGCCG GTCTCGCTGC GATCGGCGCA
AGGCAATTCT GA
 
Protein sequence
MDGVVSVRTV GHELALKAAA AAVATGAAAG CPVVAAVVGA GGDLVAFVRA SGSPSPSAKI 
AQDKAYSAAS FRVPTPDLYA MVSGNPALRD GIVAQPGLAM FGGGLPIEIA GVFVGAIGVS
GGSEAMDVEY ANAGLAAIGA RQF